LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1462	ATGGAGAAGAACTTTGCTGAATCAGGCAGTTTCGCTCGCATTGACGACAAGAAGGATGAAGGCGAGACACCACTTTCGCCGTTACCTGATTCCGGAGAGACCGATGCCAAAGAGGTTGAGGCCAAAGCGGATGATGAGGCAAAGCCACCTGATGCGGCGGATACAGAAAGCGAGCCCGCCGTTGAGAAGGAGGCCGAAGATGCTCCAATTGAGATCGCTGAATCTCCCCCTCACAGCCTTGAGAAGGTCTCAGAAGATATCGATCAATATCTTGAGACACTCGCCAAGAATGAAGATGTTGAAGAAGCTTCTTTAGAGATCCCTGATTTGATTGACAAGTTCTTGGAACTCGTTGAAGAGAAAATCACCGTGTACGACTCGGGTGGAGTTAAAGGCAAATGGGGTGAGGTTGTAGGGGAAGATTCGTTGTTGTTAGGAGCTCTGCATCGGGTTTCTAATTTAATTAAAGTGCTGAGCCAGTCTCAATCCTCCTCGGAGCAGGAGGAGATTAATAAACGAAAGGATTCGTTGGTCAATCACATGGGTGCGCTTCAGCATCGAGCCATGTCGTATTTCGAGGAAGAGTTCCGATTTCTGATGGAAGAATCTCGAAATCCGGCTGAATCTGACCCCGGTGGTCATGATCCGAAAGGGAAGCAAGTAGAACAAGGAAGGAACCAATCGTCTGATGATCAAGAATCCATCGAGGTGGAGCCTGAGTTTCCGAGTTATCCCGATGAGACCATTGAAAAATTGAAACAGATAGCGGAAGAGATGACATCAAATGGTTACCAACACGAATGCGGGCAGATTTATTTGGTTTGCAGGAGGACCACAATTGAAGAGAAGTTGAACAAAATAGGATTCGAGAAAATGAGCATCGACGAGATTATGAAAATGCAATGGCAAATATTGGAGGGAGATATAATCTCCACTTGGTTAAAAACCTTCAAGGATTGCGCTGGCACAGTCCACTTGTCCGGCGAGCGGAAGCTGGCAGAGTCGGTGTTTGGAGAAAATTCGTCCCTGGCTGTTGGCGTATCCGGCGATCTCTCCCGGTGCATTGTCATACAGCTTCTCAATTTCGCGGAAGGGGTGGCCATGTCGAAGCGAGCGGGGGAGAAACTATTCAAAACCCTAGACATGTACGAGACCTTGCGTGATGCAATCCCTGTTTTTGAAGAACTGTTACCGGAAGAGATTGCGAACGAGCTCAAAACAGAGACGACGTTTACGAAAAGCAGACTTGGCGAGAACGTGATCAGCACATTCGCTGATCTAGAAATTGCCATCAAAACAGACGCCGAGAAATCTTTGGTTGCCGGCGGTGCGGTTCACCCATTAACCCGCTACCTCATGAACTACCTGCCATTCGCCTGCGAGTACAAGGACACGTTAGAGCTAGTGTTCAAGGAGCACTCCAAGATTGAACGCGCCGACTCCACAAGTTGGCCACGCTACGAAGGGGAAGGGAATCTTGCTAACGACAATAATGCCAGCACGGAGCATGAAACGCCGTTTGTGGCGCAGGTGACTAGGTTGATGTCACATCTGGACACAAATCTGGAATGGAAGGCGAAGTTGTACAAGGACATGTCCTTGAGCTGCATCTTCATGATGAACAATGGAAGGTACATACTCCAGAAGATCAAAGGGTCAAAAGAGATGTACAGCTTGATGGGAGAGACGTGGTGTAGGAAGAGATCGTCCGATGTGAGGACCTACCATAAGAATTATCAAAGGGAAACATGGAGTAAGGTTCTAAGTTGCCTGACCCCTGAGGGGTTGACTTCGCAGGGGAAGGTGCAGAAGCCAGTGCTCAAGGAGAGGTTCAAGAGCTTCAACGCACTGTTCGATGAGATACACAAGACGCAGAGCATGTGGATTGTGAACGACGAACAGCTTCAGTCGGAGCTGAGGGTGTCGATAACGGCGGTGGTGATTCCGGCCTACAGAGCATTCTTGGGGAGGTATTCTCAGTTTTTAGACCCAGGAAGACAAACAGAGAAGTACATAAAATATCAGGCTGATGACATAGAAAACTTAATCGATGAACTTTTTGATGGACTTAACCCAGCTAAAAGAAGACAATGA	2094	0.4799	MEKNFAESGSFARIDDKKDEGETPLSPLPDSGETDAKEVEAKADDEAKPPDAADTESEPAVEKEAEDAPIEIAESPPHSLEKVSEDIDQYLETLAKNEDVEEASLEIPDLIDKFLELVEEKITVYDSGGVKGKWGEVVGEDSLLLGALHRVSNLIKVLSQSQSSSEQEEINKRKDSLVNHMGALQHRAMSYFEEEFRFLMEESRNPAESDPGGHDPKGKQVEQGRNQSSDDQESIEVEPEFPSYPDETIEKLKQIAEEMTSNGYQHECGQIYLVCRRTTIEEKLNKIGFEKMSIDEIMKMQWQILEGDIISTWLKTFKDCAGTVHLSGERKLAESVFGENSSLAVGVSGDLSRCIVIQLLNFAEGVAMSKRAGEKLFKTLDMYETLRDAIPVFEELLPEEIANELKTETTFTKSRLGENVISTFADLEIAIKTDAEKSLVAGGAVHPLTRYLMNYLPFACEYKDTLELVFKEHSKIERADSTSWPRYEGEGNLANDNNASTEHETPFVAQVTRLMSHLDTNLEWKAKLYKDMSLSCIFMMNNGRYILQKIKGSKEMYSLMGETWCRKRSSDVRTYHKNYQRETWSKVLSCLTPEGLTSQGKVQKPVLKERFKSFNALFDEIHKTQSMWIVNDEQLQSELRVSITAVVIPAYRAFLGRYSQFLDPGRQTEKYIKYQADDIENLIDELFDGLNPAKRRQ	697

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1462	697	MobiDBLite	consensus disorder prediction	1	84	-	-
	Acco06g1462	697	Gene3D	Exocyst complex component Exo70	139	696	-	-
	Acco06g1462	697	MobiDBLite	consensus disorder prediction	203	232	-	-
	Acco06g1462	697	Pfam	Exo70 exocyst complex subunit	313	685	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Acco06g1462	697	MobiDBLite	consensus disorder prediction	203	242	-	-
	Acco06g1462	697	MobiDBLite	consensus disorder prediction	9	24	-	-
	Acco06g1462	697	SUPERFAMILY	Cullin repeat-like	145	688	IPR016159	-
	Acco06g1462	697	Coils	Coil	80	100	-	-
	Acco06g1462	697	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	115	689	IPR004140	GO:0000145\|GO:0006887
	Acco06g1462	697	MobiDBLite	consensus disorder prediction	33	71	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1462	Acco-ChrAcco06	10254200	10256293	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1462	64	689	EXO70 exocyst subunit family	AT5G13990	50.693	0.0	602