Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1456 ATGGAGATGCTTCCAAGGGTTGCTGTTAAGGGTGGCGTGAAACTGCCTGTTGGTTTCAGGTTCTGTCCCACCGACGAAGAACTCATCGTTCACTATCTCAGAAAGATGGCACTTGGTCTGCCATTACCTGCGTCTGTGATTCCTGTTCTGGATGTGTTTCACACCGATCCTTGGAAGTTTCCAGGTTTTGGCGAGGCGGATTCCATGGAAAAGGGGTATTTTTTCAGCGCGAAGAATGATGTTTTCTATGGAGGCGTAATCGTGATCGCTGAAGGCACTGGCTTCTGGAAGCCCGTTGGGGACGAGATACCAATTGTTTGTCCTCGGACCAACCTGGTGGTCGGTACTCGGAAAACCCTGGTTTTCTGCGGGGGCGACACCGAAACCCAGTGGGTTATGCACGAACTTCGCCTTGCCGGCCCTGCAATGAATGTTTATCCACCCAAGATTCTGCCTTGGACGAAGTGGGCGGTCTATCGCGTTTTTCAGGAGGAGACAGATGAGAAGAAGAAGAAGCCCAAGGAAAAAAGGTCTGTGAAGAAAAAGTCCACCAAGAACAAAAAAATTCGGAAGCTTGAGGCTGATGAGGGAGTCAAACCCAGTGTCATCGATTTCGGTGCTGATGGCAACAATTCCGGCGAGGCCCCGCCGCCGCCGCCGGCATCTCCGAGTGTCAGTGAAGGCAGTGATATCACCTCATCTAACTAG 708 0.5155 MEMLPRVAVKGGVKLPVGFRFCPTDEELIVHYLRKMALGLPLPASVIPVLDVFHTDPWKFPGFGEADSMEKGYFFSAKNDVFYGGVIVIAEGTGFWKPVGDEIPIVCPRTNLVVGTRKTLVFCGGDTETQWVMHELRLAGPAMNVYPPKILPWTKWAVYRVFQEETDEKKKKPKEKRSVKKKSTKNKKIRKLEADEGVKPSVIDFGADGNNSGEAPPPPPASPSVSEGSDITSSN 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1456 235 Pfam No apical meristem (NAM) protein 16 138 IPR003441 GO:0003677|GO:0006355
Acco06g1456 235 MobiDBLite consensus disorder prediction 167 235 - -
Acco06g1456 235 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Acco06g1456 235 PANTHER NAC TRANSCRIPTION FACTOR 56 15 183 - -
Acco06g1456 235 SUPERFAMILY NAC domain 9 164 IPR036093 GO:0003677|GO:0006355
Acco06g1456 235 Gene3D NAC domain 24 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1456 Acco-ChrAcco06 10216184 10217198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1456 9 205 NAC Transcription Factor Family AT5G13180 35.648 6.64e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g1456 NAM 3.7e-23 No_clan