Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1452 ATGTCTAACCAAACTACTGGGCCATCGGTATTTGAAATTGATCAATATACAGATTTTGGACGTGAAATAATTTCGGCTGTGCTTCTGGATAGTCAAGGCGACCATGTTTCAGAAAGCGAAATGTTAGAAGAATCATATTCAGGAGAGGATCAAGAGGAAGGGGAAGATGACGACAATAATGATGATGAAGAAATAGAAGGTGACGACGGCTATAATCACCGGAAGTCAGTAGAAAATTTAGAAAAGGTTGAGATTCAAGAGTTTGTAATTTGTTCGGTGTGTTTGGAGGAGATTACTCCCTCAAATAAAGAAGAAAAAGAAGGAGCCGTCCGAATTCCTAAGCCTTGTGGTCATGTGTATCACCATAGCTGCATCGTCAAATGGCTCATCAACCACCATACTTGTCCTCTGTGTCGCTTCAAGATTACAAGCTGA 435 0.4069 MSNQTTGPSVFEIDQYTDFGREIISAVLLDSQGDHVSESEMLEESYSGEDQEEGEDDDNNDDEEIEGDDGYNHRKSVENLEKVEIQEFVICSVCLEEITPSNKEEKEGAVRIPKPCGHVYHHSCIVKWLINHHTCPLCRFKITS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1452 144 SMART ring_2 91 138 IPR001841 -
Acco06g1452 144 MobiDBLite consensus disorder prediction 34 74 - -
Acco06g1452 144 SUPERFAMILY RING/U-box 90 143 - -
Acco06g1452 144 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 71 141 - -
Acco06g1452 144 MobiDBLite consensus disorder prediction 43 66 - -
Acco06g1452 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 144 IPR013083 -
Acco06g1452 144 Pfam Ring finger domain 91 139 IPR001841 -
Acco06g1452 144 ProSiteProfiles Zinc finger RING-type profile. 91 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1452 Acco-ChrAcco06 10178376 10178810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1452 75 142 C3H Transcription Factor Family AT1G21960 35.294 1.44e-10 55.1