Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1444 ATGATGATGGATCAGGGAGAGAAGCTGCTTCTTCGCAAAAACGAGGCCTCTGATTTCGTGGCAGGTGTTGACGCTGAGCTTGGCCTTGTCACCGTGCCCCCAGACATCCACAATATTACTCCTCCCGGGTCGGGTCCTCCTTCTCCGATCCGAGACCTCGGGCTCGTCGCTGCCTTTCGCACCGTTCATCGGAAGAAACGGATGGTCCGCCAGAGGAGGTCCTCCACCGTCTCCATGAATCTCCCTCCGCCACCTCCTCCTCCTTCCTCCTCCTCATCGCACGTGCCTATCTCCCCGCTTCAATCTTACAATCCTCTCCCGCCCCCACGTGAGATTGATCACCAGAGGTTGAGATTTCTTTTCCAAAAGGAGCTCAAGAACAGTGACGTAAGCTCCCTCCGAAGGATGGTGCTCCCAAAGAAAGCAGCAGAGGCTTTCCTTCCTATCCTCGAGTCTAAAGAAGGGATTGTTATAAGCATGGATGACATCGATGGTCTTCATGTCTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGGATGTATGTACTTGAAAACACTGGGGAATTTGTTAGCACACATGGCTTACGACTTGGAGATTCCATAGTGGTTTATCAGGATAATCAAACCCTTAATTATGTGATTCAGGCTAAAAAGGCCTCTGAGCAAGATGATTTTATGGCTATATCCAGTGACAACATCAATGATCTCTTTCTGCAAGACTATGAGATTAACAAGTCAAATGGTTTGAGTGTGATGACATGTCCCACAATGAATGACACAGGCATGTCATTCATCTATGACACTACATTCTCAAATGATTCTCCATTTGACTTTTTGGGTGGATCGATGACCAGTTTCTCAAGAATTGGATCCGTCGAAACTTTTGGCTCTGTCGAGAATTTGTCACTTGATGACTTCTATTAA 933 0.4727 MMMDQGEKLLLRKNEASDFVAGVDAELGLVTVPPDIHNITPPGSGPPSPIRDLGLVAAFRTVHRKKRMVRQRRSSTVSMNLPPPPPPPSSSSSHVPISPLQSYNPLPPPREIDHQRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIQAKKASEQDDFMAISSDNINDLFLQDYEINKSNGLSVMTCPTMNDTGMSFIYDTTFSNDSPFDFLGGSMTSFSRIGSVETFGSVENLSLDDFY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1444 310 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 63 227 IPR044800 GO:0003700
Acco06g1444 310 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Acco06g1444 310 SUPERFAMILY DNA-binding pseudobarrel domain 119 218 IPR015300 -
Acco06g1444 310 SMART B3_2 121 223 IPR003340 GO:0003677
Acco06g1444 310 Pfam B3 DNA binding domain 121 219 IPR003340 GO:0003677
Acco06g1444 310 CDD B3_DNA 119 221 IPR003340 GO:0003677
Acco06g1444 310 MobiDBLite consensus disorder prediction 79 93 - -
Acco06g1444 310 MobiDBLite consensus disorder prediction 66 108 - -
Acco06g1444 310 Gene3D - 117 236 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1444 Acco-ChrAcco06 10102607 10105725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1444 64 310 B3 DNA Binding Superfamily AT3G26790 54.122 1.48e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco06g1444 B3 7.5e-16 CL0405