Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1430 ATGTCCATCTTGCCCTCACAATCTCAGGCATCAACCTCGTCGTTATCTCAATCTCCTATATCTCCAAACCCTAATTCCCAACATGGAAACCTGTCTCTCCCGTCTCATTCTCCTCCATCCGTCTCCTCTCCTCCCCTTCAAGTTCCATCCTTCCGATCTCTCCGGATCTGCGATTCACCATCTCCCGTCGCTACGCCCGACGTTAATTCAGGTCCATCGACTCCAGCTACAGAAGATTCTGGTGGACCTTCCAAAAAGGTGACTGAGTTGGGATCTCCAAATGGTATGAAGATTTCATCTCACCAAAACTCTGGAGTGCATTCCCATAGTCAGTCAAGAAGAATGGCTTCTAGATCATCCCAGTCAGCAGGGAAGATGACAGGAACAGTTTCTTCTCCTGGAGATCAGCAGAATACTAGGTCCTTCAATCCTCATGGGAACACCCTTTTAGCAGGAAGAAAATCCCAGATGGTTAATGGTAATCACTTGTTGAACTTTCATTATGATCCCATATCTCATCCAACAAGGGGTCCTCCTCCTCCGCCACCAAGAAGGCAGCAGAAGAAAAGGCCATACAACAAAGATTTATTTTTACAGGCAAATTACAAATTTGTGGTGTTAGATTCAGGAGACTATTCACCAGAGTCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTGTGTGTGAGGTATTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCACTTTGTCCGCAAATAACCTCTTGTGGACATATTTTTTGTTTCCCTTGTATCTTACAATATTTGATGATGGGCGAAGAGGATCATAAAGGTGATTGCTGGAAAAGGTGTCCCCTATGTTTTGTCATGACATCTGCAAAGGATTTATATACCATATACATTGAAAATGTTGAGCAGTATCAAGTTGGAGATATCATTGAGTTCAGTCTCTTAACTCGGAAAAAGGACTCTTTTACTCTGTCTGATAAAAATAAGGAGACGGATGTCTTATTATGTGGCGATAATAATTTATGTGACTCATTTTCTAAGTTCACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCAATATTGGATCTAGATGGTTGGCTAGCTAAAGCAGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCGATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCTTGTGATGTTGGAAAATCCTCTAGGCCTATTGATTGTGGACATCATAAACCATCGGCAGTTGTAAATGGCACTGATGTTGATGATGAAATCCGGTCTTTTGGTTCAGGATCTTCCTCTACAGATTTCCACGACCCAAGCAAGGGTATAATAATGGATAATTCAAATGCAAGTGTGTGTCCAGATCAAACTTTGGATTTGGAGAGGAAAGTATTAGATCAAGAAATTAATTTATCTTCTTCCTATGGGGAGAAAAATGATATTCAAAGGCATCCAAATGGTTTTGGAGATTCAAAGGAGAGTGACTCGTATAATTTTTATCAGGCTGCTGATGGTCAGCATCTCATTCTTCATCCCCTGGACATGAAGTGTCTTCTTCACCATTATGGGAGCTATGATATGCTTCCACACAGGATAAGTGGTAGGATTCTGCAATTGGAGACAGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTGACGACAACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGTTGCCCTCTGAATCCCTGGCCCCATTCATGGACGAATTGAAGAAGCGTGCAAACCAGAGGAGGCAACTTGCAAAGAAGGAACAAAAAGAGAAAAGCAAGGCTGACGCTGCTTCTACGCATTCTATTCCCATACCAACCACTTCTCAGCTGATGTCTCATGACAATTCTCCTCCATTCTCCATGGATGATTTTGAAGCTTTGGGGAATTCGGCCGTATCTTCAAGTCCTCCTGTTGTTGTGGGAAGAAGTCTGTTTTCAAGTGTCACAAGACTTGGTTTTGCTGCTGGTCATGATTCTCCATCCTTGAACATTCAAGAAACTAATGGCAATCATAATATAGCAACTGATTCGTCTGGCTTGACAGGTCTGAGAAATGTGGAGACATCGTCATTTGCCAGTGTTATATCTAGAGCAGAGTCTATCAATGGCTTAAATGCACCCAGGACAAATGACTTGGGTAAGAAGGGGAAGAAGCCAACTAGAGTTCTCCTGTCAACAGCCGGGGGCAGGCGTTACTGA 2283 0.4266 MSILPSQSQASTSSLSQSPISPNPNSQHGNLSLPSHSPPSVSSPPLQVPSFRSLRICDSPSPVATPDVNSGPSTPATEDSGGPSKKVTELGSPNGMKISSHQNSGVHSHSQSRRMASRSSQSAGKMTGTVSSPGDQQNTRSFNPHGNTLLAGRKSQMVNGNHLLNFHYDPISHPTRGPPPPPPRRQQKKRPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMTSAKDLYTIYIENVEQYQVGDIIEFSLLTRKKDSFTLSDKNKETDVLLCGDNNLCDSFSKFTLTSDVDLSVRQAILDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRACDVGKSSRPIDCGHHKPSAVVNGTDVDDEIRSFGSGSSSTDFHDPSKGIIMDNSNASVCPDQTLDLERKVLDQEINLSSSYGEKNDIQRHPNGFGDSKESDSYNFYQAADGQHLILHPLDMKCLLHHYGSYDMLPHRISGRILQLETVTQSEAMRRRYRYLSHFPLTTTFQLCEIDLSEMLPSESLAPFMDELKKRANQRRQLAKKEQKEKSKADAASTHSIPIPTTSQLMSHDNSPPFSMDDFEALGNSAVSSSPPVVVGRSLFSSVTRLGFAAGHDSPSLNIQETNGNHNIATDSSGLTGLRNVETSSFASVISRAESINGLNAPRTNDLGKKGKKPTRVLLSTAGGRRY 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1430 760 MobiDBLite consensus disorder prediction 1 37 - -
Acco06g1430 760 PANTHER RING FINGER 10 FAMILY MEMBER 70 760 IPR039739 -
Acco06g1430 760 MobiDBLite consensus disorder prediction 1 150 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 606 641 - -
Acco06g1430 760 SMART ring_2 241 287 IPR001841 -
Acco06g1430 760 MobiDBLite consensus disorder prediction 606 624 - -
Acco06g1430 760 CDD RING-HC_RNF10 239 296 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 734 760 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 627 641 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 165 192 - -
Acco06g1430 760 FunFam RING finger protein 10 234 302 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 93 150 - -
Acco06g1430 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 235 302 IPR013083 -
Acco06g1430 760 Coils Coil 598 618 - -
Acco06g1430 760 ProSiteProfiles Zinc finger RING-type profile. 241 287 IPR001841 -
Acco06g1430 760 SUPERFAMILY RING/U-box 240 291 - -
Acco06g1430 760 MobiDBLite consensus disorder prediction 63 81 - -
Acco06g1430 760 ProSitePatterns Zinc finger RING-type signature. 256 265 IPR017907 -
Acco06g1430 760 Pfam Zinc finger, C3HC4 type (RING finger) 241 287 IPR018957 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1430 72 696 C3H Transcription Factor Family AT3G26730 53.882 0.0 631