Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1427 ATGAGCACTCTATATTCAAATTCTGTAAATTTCATCACAATTGAAATATCGTGCAACACGTTCTTAACACTACCCCAACCTGTCTGTTACCGGAGGCTTTCGGACCAGCTATTTATGGGGGCGCAATCTTTGAACCGTGTTAGTCCGAATCAGAGTCCCATTCCTAACACTGAGCTGGGTGCTGAAATGGGTCGTCGTCATTCCGTCGTTTCGACCCCCAAGCGTAATGCAGTATCGAATGGTCATGTATGTGACAAGAATGACGAGTCTAATGGTTCAAAAAATTCGCCAATTCAGAGAAGAACCAGTCCTCGAATACAAGCCAAGCAAAAAGTGGATATGGAACTTCCAGTGCACTGCGGAGATGAGCTGCACAATGAATCTAGGAATGCGAAGATGAGTACGTGTAAAACAAGTGTTAACTACGAAAATGTGGATAAGCAACAGGTAGTTGGAGGGAGAACTAAAAAATTGGATAATTCAACAACTAAGGAACGACAAGAGCATAAGGAGTCTTTAATACAGAGAAGAACTAGTCCTCGAATCCTAGCCCGGCAAAAGGTGGATAAGGCACTTCCAGTGTCCAGGAGGGGTCAGCTGTCTGCCAGCGATATGAAGAAGAATACACCCTGCAAAAGAAGTCGCAATGACGAAATTGGTTGTAAGGAAAATAATGTGGAGGACCAACAGAAAGCTAAGAAATTGAACCAGTCAATTACTGAAGAGCCTAGTGAGGACTATGAATCGTCAGCTCAAAGGATAGCCAACTCTCGAGTTCAAAGTAAGGAATTACTAGTGCGACGCAGAGTAGAGTTATTAGAGGATCGAGATAACACTGGTAATGATAAGAAAAGCAAGTGTTTCAAAAGAAGTTGCAATGATGAAAATGGGGGTAAGGAAGGTGGAGTAGGCAATTCACCTAGAGTAAAGAAGCTGAAAGAGGCTACCTTGGTCCATAACAAACGGACATCTGGGGGGTCGAAAGTTAATGGGGCAGGGACTTTGGCGGATAAAAGTGACTCTGTCAAGGTGAAAGAAACGCTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTGCAGGAGGAGGAAAAGAGGTGTAACAAAGTGGGATCTCCCATCAAAGTGTCTAAAGGAGGTTCAAAATCTAAGGAGGAGGAGAAGACGCGTAACAAAGTGAAATCTTCCCCTAAAGTGTCTAAAAAAGGTTCAAAATCTAAGAAAAATGCAACCGTTAATGTTGAAAAGTCAATGACTAAGCGACCTGATTTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGATATTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCACGTGCTGAAATGGCTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTACAGTCAGTATAAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGTATGTATGAGGATGATGTTGATAATGCTGAGGACGTTATATATACTGGTCAAGGTGGGCAGAATTTGACTGGTGATAAGCGTCAAATTGGTGATCAGAAATTAGTGCGGGGTAATTTGGCTTTGAAGAACTGCATGGAGCAATGTATGCATGTAAGGGTGGTTCGTGGACATGAATCTTCTAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAATTATTGGGCAGAAAAAGGATTTTCTGGGTTTACGGTCTACAAGTTTCGGCTGAGAAGGCTTGATGGGCAACCAATCTTGACAACTAACCAGGTGTATTTCATTAATGGACGTGCCCCTCAGTCCATTGCTGAAATACGAGGGCTCGTAATTGAAGACATCTCCAATGGTCAAGAAGAGGTGCCTATTCCTGCCACTAACCTGATTGATGACCCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTCGCTTTCAAAGAATCTAAAGCTCCCCTCAGCTGTCACTGGATGCAATTGCAAAGGCGTTTGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATCTGATTTCCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAGGATGTTGTCTTTGAATGTGGGCCAAAATGTGGATGTGGTCCTGGTTGTGTTAATCGAACTTCTCAAAGAGGACTGAGATATCGTCTTGAGGTTTTTCGCACTGCGAAGAAAGGATGGGCTGTTAGATCTTGGGATCACATACCTTCTGGAGCACCAGTTTGTGAATACACAGGATTACTTAAGAGGACAGAAGATGTAGAGAATACACTCGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAAGGAAACATCTGCAGCAGTCAAGCTCCTGGACAATTATGCAGATGATGATTCTGAATCCATACCTGAGTTTTGTATTGATGCTGGATCAACTGGAAATATTGCTCGATTCATAAACCATAGTTGTGAACCTAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGCTATTTGCTGCAGACAACATACCACCCTTACAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTGAAGAAAATGACGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2766 0.4212 MSTLYSNSVNFITIEISCNTFLTLPQPVCYRRLSDQLFMGAQSLNRVSPNQSPIPNTELGAEMGRRHSVVSTPKRNAVSNGHVCDKNDESNGSKNSPIQRRTSPRIQAKQKVDMELPVHCGDELHNESRNAKMSTCKTSVNYENVDKQQVVGGRTKKLDNSTTKERQEHKESLIQRRTSPRILARQKVDKALPVSRRGQLSASDMKKNTPCKRSRNDEIGCKENNVEDQQKAKKLNQSITEEPSEDYESSAQRIANSRVQSKELLVRRRVELLEDRDNTGNDKKSKCFKRSCNDENGGKEGGVGNSPRVKKLKEATLVHNKRTSGGSKVNGAGTLADKSDSVKVKETLRLFNKHYLHFVQEEEKRCNKVGSPIKVSKGGSKSKEEEKTRNKVKSSPKVSKKGSKSKKNATVNVEKSMTKRPDLKALSKMLENKEILYPEKRIGDIPGIKVGHQFYSRAEMAAVGFHSHWLNGIDYMGQAYSKVSQYSQYKFPLAVAIVLSGMYEDDVDNAEDVIYTGQGGQNLTGDKRQIGDQKLVRGNLALKNCMEQCMHVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGFSGFTVYKFRLRRLDGQPILTTNQVYFINGRAPQSIAEIRGLVIEDISNGQEEVPIPATNLIDDPPVAPTGFKYKKSISLSKNLKLPSAVTGCNCKGVCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDHIPSGAPVCEYTGLLKRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQKETSAAVKLLDNYADDDSESIPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMTCYCGAADCRKRLF 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1427 921 Pfam Pre-SET motif 632 733 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco06g1427 921 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 114 921 IPR025794 GO:0016571
Acco06g1427 921 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 169 914 - -
Acco06g1427 921 Gene3D - 426 614 IPR036987 -
Acco06g1427 921 ProSiteProfiles SET domain profile. 741 891 IPR001214 GO:0005515
Acco06g1427 921 Pfam SAD/SRA domain 442 602 IPR003105 -
Acco06g1427 921 MobiDBLite consensus disorder prediction 378 393 - -
Acco06g1427 921 SMART set_7 741 897 IPR001214 GO:0005515
Acco06g1427 921 MobiDBLite consensus disorder prediction 193 254 - -
Acco06g1427 921 ProSiteProfiles YDG domain profile. 443 598 IPR003105 -
Acco06g1427 921 ProSiteProfiles Post-SET domain profile. 905 921 IPR003616 -
Acco06g1427 921 Gene3D SET domain 622 921 IPR046341 -
Acco06g1427 921 MobiDBLite consensus disorder prediction 154 173 - -
Acco06g1427 921 MobiDBLite consensus disorder prediction 72 105 - -
Acco06g1427 921 SMART preset_2 629 725 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco06g1427 921 SMART PostSET_3 905 921 IPR003616 -
Acco06g1427 921 SUPERFAMILY SET domain 626 898 IPR046341 -
Acco06g1427 921 MobiDBLite consensus disorder prediction 65 110 - -
Acco06g1427 921 SUPERFAMILY PUA domain-like 425 611 IPR015947 -
Acco06g1427 921 MobiDBLite consensus disorder prediction 208 241 - -
Acco06g1427 921 SMART G9a_1 438 602 IPR003105 -
Acco06g1427 921 Pfam SET domain 752 891 IPR001214 GO:0005515
Acco06g1427 921 ProSiteProfiles Pre-SET domain profile. 676 738 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco06g1427 921 MobiDBLite consensus disorder prediction 370 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1427 Acco-ChrAcco06 9974062 9984477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1427 429 921 EF-hand Containing Proteins AT5G13960 66.869 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco06g1427 SAD_SRA 2.5e-49 CL0178