Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1421 ATGTCAAGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCTGTGGCACTGGTAGGGATAGTTATACTACTCATATGGTTTTGCCTGTTTCACAAGAGTGGTGTTTCTAGAAACTCAGAGACAGGGTCCTCTGATCCTTCACAAGCGGGAAGACCTGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGCTTGAAGAACTGTCTCAGGCTACAAATAATTTCAGTGACAAAAATCTGATTGGAGAAGGCAAATTTGGAGAAGTCTACAGGGGTTTACTTCAAGAGGGAGTGCTTGTAACCATAAAAAAGCGCCATGGATTCCCCAGTCAGGAATTTGTAGATGAGGTACAAGTCCTCTCATCCATTCGACACCCAAATCTTGTAACTCTCCTGGGATACTGCCAGGAAAACAATCTACAGTTTCTCATATATGAATACGTGCCTAATGGGAGCGTCTGCAGTCACTTGTATGGAGCTGGTCAACAATCACGTGAGAAGCTGGAATTCAAGCAAAGGCTTTCAATAGCTGTAGGCGCAGCTAAAGGTTTAGCTCATCTTCACTCCTTGAGCCGTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTCGTGGATGAAAAATTCAACCCTAAGGTCGCCGATGCAGGGCTTCGTAACTTCCTCGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGTTGGAGCAGATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAAAAGATATTCTGAAAAGAGTGATGTGTACAGCTTTGGGGTATTTTTGCTGGAACTGTTAAGCGGGAGGGAAGCAACTGAATCACCACCTTCAGACTCAAATCAGAATCTAGTTGCATGGGTGCAAAGTAAGCGAGAGCATGGGATTATAGCAAGCATAGTTGATGAAAAAATGGGAAGCAATTATACAGGAGAAGGCATGGAAGAGTTTATGTCACTGATAGTCCCATGTATTGATACTTCAAGTGAGAGACGACCTGCAATGAGCTATGTGGTGATGGAAATGGAACGAATACTTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACCCCAATCGTGACCCTTGGAAGCCAATTATTTAAAGCTACAAAATAA 1140 0.4377 MSRNLAATVGGAAGAVALVGIVILLIWFCLFHKSGVSRNSETGSSDPSQAGRPGGIELTVRDARRFELEELSQATNNFSDKNLIGEGKFGEVYRGLLQEGVLVTIKKRHGFPSQEFVDEVQVLSSIRHPNLVTLLGYCQENNLQFLIYEYVPNGSVCSHLYGAGQQSREKLEFKQRLSIAVGAAKGLAHLHSLSRRLVHKDFKTANVLVDEKFNPKVADAGLRNFLGRVEIAGPSSQVGADEIFLAPEVREFKRYSEKSDVYSFGVFLLELLSGREATESPPSDSNQNLVAWVQSKREHGIIASIVDEKMGSNYTGEGMEEFMSLIVPCIDTSSERRPAMSYVVMEMERILEKERNLTTVMGEGTPIVTLGSQLFKATK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1421 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 356 IPR047117 -
Acco06g1421 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Acco06g1421 379 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Acco06g1421 379 Pfam Protein tyrosine and serine/threonine kinase 82 346 IPR001245 GO:0004672|GO:0006468
Acco06g1421 379 Gene3D Phosphorylase Kinase; domain 1 45 150 - -
Acco06g1421 379 FunFam Protein kinase superfamily protein 43 150 - -
Acco06g1421 379 FunFam Protein kinase superfamily protein 151 364 - -
Acco06g1421 379 SUPERFAMILY Protein kinase-like (PK-like) 58 353 IPR011009 -
Acco06g1421 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Acco06g1421 379 ProSiteProfiles Protein kinase domain profile. 78 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1421 Acco-ChrAcco06 9904013 9906435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1421 4 373 Receptor kinase-like Gene Family AT3G46290 35.115 2.01e-60 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Acco06g1421 PK_Tyr_Ser-Thr 5.9e-41 CL0016