Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1391 ATGGAATTCATAAAACAGTCTCGACTCTCTCAGTTTTTCTCAAACCCATTTGAAAGTCTCCCTCAGCTCGTCATCCCCTGCGTTGGCAGAGAGATCATCTTACTTCGCTTAAGGAACTCAAGAACACCCATAGCAAAAATGAACGATCTAATGACCAAATCATTCACCAGCTACGTGGATCTGAAGAAAGCTGCAATGAAAGACGAAGTGGATCTGGAAGCTGGTCTTCCACATTCCGGCGTGGAACTTCGATCTTCAACAAATCAATTGGATACCGACATGGGTCTCTTCCTGGAAGAGGCCGAGAAGGTGAAAACAGAGATAGGGGATCTCCGTGACATTCTGGGAAAACTTCAGCAAGCAAATGAAGAAAGTAAGTCCCTTCACAAGCCTGAGGCTCTAAAATCCTTAAGGAACAGAATCAACGCCGACATCGTCTCTGTTCTCAAGAAGGCTAAAACAATCCGGTCTCAATTGGAAGAAATGGATCGAGCTAATGCAGCCAATAGGAGGCTCTCTGGCCTCAAAGATGGCACGCCTGCCATTTACAGAACAAGAATTGCTGTCACCAATGGCCTTCGGAAGAAACTCAAGGAGCTAATGATGGAGTTTCAGGATCTGAGGCAGAGGATGATGACTGAGTACAAAGAAACCGTGGGAAGGCGCTACTTTACTGTAACAGGGGAACACCCAGAAGAAGAAGTGATAGAGAAGATCATATCCAATGGAGAAGAGGAGTTCTTAAGCAAAGCAATTCAAGAGCACGGGAGAGGGAAAATTCTAGAGACGGTGGTGGAGATACAGGACAGGCACGACACAGCTAAAGAGGTGGAGAAGAGTCTTCTGGAGCTGCACCAGCTATTTCTAGACATGGCGGTGATGGTTGAAGCTCAGGGCGAGAAGATGGACGACATTGAGCACCATGTGCTTCATGCTTCTCACTATGTCAAGGATGGGACTAAAAATCTGCAGACTGCAAAGAAATACCAGAGAAGCAGCAGAAAGTGGATGTGCATTGGGATCATACTTCTCCTGATTCTGATCCTCGTAATTGTCATCCCTATTGCCACTAGTTTCAGCAGCTCTTGA 1089 0.461 MEFIKQSRLSQFFSNPFESLPQLVIPCVGREIILLRLRNSRTPIAKMNDLMTKSFTSYVDLKKAAMKDEVDLEAGLPHSGVELRSSTNQLDTDMGLFLEEAEKVKTEIGDLRDILGKLQQANEESKSLHKPEALKSLRNRINADIVSVLKKAKTIRSQLEEMDRANAANRRLSGLKDGTPAIYRTRIAVTNGLRKKLKELMMEFQDLRQRMMTEYKETVGRRYFTVTGEHPEEEVIEKIISNGEEEFLSKAIQEHGRGKILETVVEIQDRHDTAKEVEKSLLELHQLFLDMAVMVEAQGEKMDDIEHHVLHASHYVKDGTKNLQTAKKYQRSSRKWMCIGIILLLILILVIVIPIATSFSSS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1391 362 Gene3D - 94 222 - -
Acco06g1391 362 CDD SNARE_syntaxin1-like 263 325 - -
Acco06g1391 362 PANTHER SYNTAXIN 105 348 IPR045242 -
Acco06g1391 362 SMART SynN_4 89 216 IPR006011 GO:0016020
Acco06g1391 362 Pfam SNARE domain 301 352 IPR000727 -
Acco06g1391 362 Coils Coil 190 217 - -
Acco06g1391 362 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 91 222 - -
Acco06g1391 362 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 264 326 IPR000727 -
Acco06g1391 362 ProSitePatterns Syntaxin / epimorphin family signature. 270 310 IPR006012 GO:0005484|GO:0006886|GO:0016020
Acco06g1391 362 Pfam Syntaxin 97 299 IPR006011 GO:0016020
Acco06g1391 362 CDD SynN 94 251 IPR006011 GO:0016020
Acco06g1391 362 SUPERFAMILY t-snare proteins 92 319 IPR010989 GO:0016020|GO:0016192
Acco06g1391 362 Gene3D - 261 360 - -
Acco06g1391 362 FunFam Syntaxin 132 257 357 - -
Acco06g1391 362 SMART tSNARE_6 259 326 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1391 Acco-ChrAcco06 9641889 9643259 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1391 47 362 SNARE and Associated Proteins AT1G08560 67.085 1.53e-138 394