Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1386 ATGGCTAGCCCACAGTCCACTTTGCCTCCGGGTTTCAGGTTTCACCCTACTGATGAGGAGCTCATTCTTCACTATCTCAGGAAGAAGATCGCCTCTTTGCCTATACCCGTCTCCATCATTGCCGAGGTTGATATCTACAAGTTTGATCCCTGGGACTTACCTGAGAAGGCGGCGTTTGGGGACAAGGAATGGTACTTCTTCAGTCCTCGAGACCGCAAGTACCCGAACGGCGCGAGGCCAAACAGGGCGGCCGCTTCAGGTTACTGGAAGGCCACCGGAACTGATAAGACCATAGTGGCGGCGTTGCCGGGAGGAGGATCGGCGGAGAGCATGGGGGTGAAGAAGGCTCTGGTGTTCTACACCGGAAAACCCCCCAAGGGCGTTAAGACTAACTGGATCATGCATGAGTATCGCCTCGTCAACAACACCAGAAACAGATCCCCCAAGTTCCAAGACTCCTCCATGAGGTTAGATGACTGGGTTCTCTGCCGAATTTACAAGAGGTCCAAACATGCTGAATCTCCCACTGCAGAAGCAGAGACCTTGGTGGCTGACCAAGATCCCCCAGAAGAGCACATAGTATTACCAAGCTCTCAATCTCCCTCTCCTCCTCAACAAAACAATCTGATTTCTCAGAAATCGTTGTCTTTCTCGAACCTGTTGGATGCCTCAGACTTCTCCATATTGAGCAGCTTGTTGTCTGACAACTATTCAACCCCACCTGGGTTTGAATCTTCTGCTGCTGCTGCTGATAATTCTAATTCTGAAGTTATCAATCTGAACCACCAATCATTTCAAAACAATCATACCAACAACAGCTATGACTTGTTTCAGAGGACCCCTCAATTGATGAACCATTCCTCCCTCCAAAACATGGAAAATAACATGCACAAGCGTCAGATTTCAGGGCTGGATGAGGAAGCCTCGTACCCATCAAAGAGGTATCTGAGCTCATCCTGCAGTCTCCCTAATAACAATACCAAGCATCAACTCGACAGCCCACAATGGAGTTTCCCCCTCAAGCAGTCGCTGTTGAACCAGCAGTTACTCCTGGGTCCTCATCTTCGTTTCCAGGGATAA 1080 0.4954 MASPQSTLPPGFRFHPTDEELILHYLRKKIASLPIPVSIIAEVDIYKFDPWDLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAALPGGGSAESMGVKKALVFYTGKPPKGVKTNWIMHEYRLVNNTRNRSPKFQDSSMRLDDWVLCRIYKRSKHAESPTAEAETLVADQDPPEEHIVLPSSQSPSPPQQNNLISQKSLSFSNLLDASDFSILSSLLSDNYSTPPGFESSAAAADNSNSEVINLNHQSFQNNHTNNSYDLFQRTPQLMNHSSLQNMENNMHKRQISGLDEEASYPSKRYLSSSCSLPNNNTKHQLDSPQWSFPLKQSLLNQQLLLGPHLRFQG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1386 359 MobiDBLite consensus disorder prediction 174 209 - -
Acco06g1386 359 PANTHER NAC TRANSCRIPTION FACTOR 56 8 241 - -
Acco06g1386 359 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Acco06g1386 359 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Acco06g1386 359 FunFam NAC transcription factor 56 17 173 - -
Acco06g1386 359 MobiDBLite consensus disorder prediction 193 209 - -
Acco06g1386 359 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Acco06g1386 359 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1386 Acco-ChrAcco06 9598955 9600229 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1386 4 359 NAC Transcription Factor Family AT3G04070 49.051 1.41e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g1386 NAM 7.2e-40 No_clan