Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1382 ATGGAAGAGCCGGTCGTGGTGAACAAAGTTGAAGATCAGCCTCTGGATTTGCCTCCGGGCTTCAGATTCCACCCCACTGATGAGGAAATCATCACTTGTTATCTCATAGAGAAGGTCCTCAACAGCAGTTTCAGTGCAACTGCCATCGGAGAGGCCGATTTGAACAAGTCCGAGCCTTGGGACTTGCCCAAGAAAGCCAAGATGGGAGAGAAAGAGTGGTACTTTTTCTGCCAAAGGGACAGGAAGTATCCGACGGGGATGAGGACAAATCGGGCCACCGAGTCCGGTTACTGGAAGGCCACCGGAAAAGATAAAGAGATTTACAAAGGCAAAGGCAACCTCGTTGGCATGAAGAAGACCCTCGTCTTCTACCGAGGAAGAGCTCCTAAAGGAGGAAAAACCAACTGGGTTATGCATGAGTTCAGATTGGAAGGCAAATTCGCCACTTACAATCTCCCCAAAGCTGCCAAGGATGAATGGGTTGTGAGCAAGGTTTTCCACAAGAACTCAGATGTGAAAAAGAACCCAATTGAAGGCCTTTTGAGGATTAACTCTCTCGGTGATGATTTGCTTGACTATTCCTCACTCCCTCCTCTCATGGATCCTCCTTTCAAGAGTACCAACCCATCCCCACCGCTCATCTCATCATCTAAACCATCCGACGGCTATTATGCCCCCAACCTCTCCATCACCAACAACAATAATCAGCAGCTGATGATGAAGCCTCAGGCTATGATGACGCCCACCAACAACAATTACACCATCAATCATCAGGCCAATTCCAGTTTCCATCCTAATCAGATTCATCAAATCCAAAATCCAACTAGCAGCTTTTCGTTTGATAATAATAATCCTGGTTATTTGATGAGTAATGATCAGTTTCTGAGAGCATTTGCGGCGAATAATAACGGCGGCGACAGCGAAGGCTTGTTTGGGTTGGACAAACTGTGCAAGACGGAGCCGTTGGTGTCGACATCTGGCAACCAATCCGTGGTGAGTGTGTCGCAGGATACAGGCGTCAGCAACGACATAAACACCGACACTTCCTCGGCTGTTTCTAAGCTCCACATGGGAAAGAACAAGGCATTGTACGACTATCCTGAGGCTCCATCCGCTGGGCCCCTCTCTGACTTGGAATGCTTCTGGGATTACTGA 1155 0.4823 MEEPVVVNKVEDQPLDLPPGFRFHPTDEEIITCYLIEKVLNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGGKTNWVMHEFRLEGKFATYNLPKAAKDEWVVSKVFHKNSDVKKNPIEGLLRINSLGDDLLDYSSLPPLMDPPFKSTNPSPPLISSSKPSDGYYAPNLSITNNNNQQLMMKPQAMMTPTNNNYTINHQANSSFHPNQIHQIQNPTSSFSFDNNNPGYLMSNDQFLRAFAANNNGGDSEGLFGLDKLCKTEPLVSTSGNQSVVSVSQDTGVSNDINTDTSSAVSKLHMGKNKALYDYPEAPSAGPLSDLECFWDY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1382 384 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Acco06g1382 384 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Acco06g1382 384 FunFam NAC domain-containing protein 100-like 26 172 - -
Acco06g1382 384 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 269 - -
Acco06g1382 384 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Acco06g1382 384 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1382 Acco-ChrAcco06 9572509 9574034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1382 1 211 NAC Transcription Factor Family AT5G18270 73.059 3.86e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g1382 NAM 7.4e-39 No_clan