Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1371 ATGGATGTTTGCCGGAATGCTTCAGTTTCCGGCGACTGCGAACAAGAGCAGGTCCTCTTGTCTTCCTGCTCAAAGCTTTCAACCTTCTCAACCACTCTTGACGACCTCTTCTCGTCTCATAACACGGAAGTGGATGTTGGCTTAGAATGGCTTTCTGTATTTGTGGAAGACTGTTTTTCCAGTTCAGCATGTTGCCTCTTGGCGCCTACTGATGCCAAAAACACAGAGGCAAACTCTAAACCCTCCGTACAATTACAGAGAGCTCAGCAAAAGCAATCTCCTCTGCAAAGTTTTGCAGTGCCAGGTAAGGCGAGAAGCAAAAGGAAAAGGCTTTCAGCCCCAAGAACCAAAAACCCGTTGAGCAGCTGGTCACACCATTTGAACCCACAAAATGAAGCCATAGCTTCAGACCCTCCTCTTCTTAAACAAGCCTACTGGTTAGCTGATAGTGAACTCATGTTACCCACGAAGGAAGATGAGCAAGTAGAAACAGAGGATCACAAAGAAGAGCAAGAGGTGGAAGAAGAGAAGAGGACTGTTAGTAAGAAGGAGAGTTTTGAGAGCTTAGTCTCAGAGTGTGAAGAAGGTATCAATGGGCAGAATCAAATGCCAAGAAGGTGCACTCATTGCCTTGCACAGAGGACCCCACAATGGAGGACAGGGCCATTGGGTCCAAAAACACTATGTAATGCATGTGGAGTGAGGTACAAGTCTGGTAGATTGCTTCCAGAATATAGGCCAGCCAAGAGTCCTACTTTTGTAAGCTACTTGCACTCCAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCTGTTCTGTCTCCTGTCTCTACCAGTGAGGACTAA 846 0.4645 MDVCRNASVSGDCEQEQVLLSSCSKLSTFSTTLDDLFSSHNTEVDVGLEWLSVFVEDCFSSSACCLLAPTDAKNTEANSKPSVQLQRAQQKQSPLQSFAVPGKARSKRKRLSAPRTKNPLSSWSHHLNPQNEAIASDPPLLKQAYWLADSELMLPTKEDEQVETEDHKEEQEVEEEKRTVSKKESFESLVSECEEGINGQNQMPRRCTHCLAQRTPQWRTGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVLSPVSTSED 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1371 281 FunFam GATA transcription factor 198 279 - -
Acco06g1371 281 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 202 265 - -
Acco06g1371 281 CDD ZnF_GATA 206 253 IPR000679 GO:0006355|GO:0043565
Acco06g1371 281 PANTHER GATA TRANSCRIPTION FACTOR 14 274 - -
Acco06g1371 281 MobiDBLite consensus disorder prediction 75 126 - -
Acco06g1371 281 SMART GATA_3 201 255 IPR000679 GO:0006355|GO:0043565
Acco06g1371 281 Pfam GATA zinc finger 207 241 IPR000679 GO:0006355|GO:0043565
Acco06g1371 281 MobiDBLite consensus disorder prediction 75 99 - -
Acco06g1371 281 ProSitePatterns GATA-type zinc finger domain. 207 232 IPR000679 GO:0006355|GO:0043565
Acco06g1371 281 Coils Coil 157 177 - -
Acco06g1371 281 Gene3D - 197 269 IPR013088 GO:0006355|GO:0008270
Acco06g1371 281 ProSiteProfiles GATA-type zinc finger domain profile. 201 237 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1371 Acco-ChrAcco06 9508805 9509918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1371 21 269 C2C2-Gata Transcription Factor Family AT4G32890 38.911 1.00e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco06g1371 GATA 3.1e-14 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0856 02 6046653 6047830 Acco06g1371 06 9508805 9509918 CCT