Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco06g1345 | ATGAACGATCTTCTATCGGGATCATTTGAAATCCGGCGCGGGCAAGGAAATGGGGACGTCGAGTTGGGGTCATATTTACGGACTTCAGGAGAACTGAGTTTGGATATGTTCTTCAAAAAGGTTCAAGAGCATGATAAACAATTTGAGAGGCTGGGTAAGCTTCTCAGACGGCTCCAGGATGCTCACGAGGAGTCCAAAGCAGTGACCAATGCTCCTGCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGGTGAAGTCAAGAAAATTGCCTATCACATAAAAACAAGAATTGAAGAATTGGACAGAGAAAACCTGGAAAATAGGCAAAAGCGTGGGTGTGGAGAAGGAACAGGTATCGACAGGTCAAGAATAGCAACCACCATTGCCTTAAAAAAGAAATTGAAAGACAAGATGGATGAATTTCAGAGGCTGAGGGAAATCATACATCAAGAATACCGTGAGGTTTTAGAGAGGCGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAGACTGGAGATGGTGAACAGATTTTCCAGAATGCAATTAAGAAACAAGGACGAGGACAGGTACTAGACACCCTAGCGGAAATTCACGAACGGCACGAAGCAGCTAGAGACGTTGAGAAGAAGATTCTGGAATTGCAGCAGATATATCTGGATTTGGCAGTGCTGGTTGATTCACAGGGAGACATTCTTAACAATATAGAATCCCAGGTATCAACTGCAGTAGATCACGTGCAGCAAGGCAATAATGCACTAGTGAAGGCAAAGAAGGCACAGAAGAGTACGAGAAAATGGATGTGCATTGCTATAATAATACTTCTTGCTGTTATTGCCATCGTTCTTACTTCTGTCCTCAAACCTTGGACTAACAAAAGAGGAGCCTAG | 918 | 0.4314 | MNDLLSGSFEIRRGQGNGDVELGSYLRTSGELSLDMFFKKVQEHDKQFERLGKLLRRLQDAHEESKAVTNAPAMKDIKQRMEKDVGEVKKIAYHIKTRIEELDRENLENRQKRGCGEGTGIDRSRIATTIALKKKLKDKMDEFQRLREIIHQEYREVLERRVYTVTGTRADEETIDRLIETGDGEQIFQNAIKKQGRGQVLDTLAEIHERHEAARDVEKKILELQQIYLDLAVLVDSQGDILNNIESQVSTAVDHVQQGNNALVKAKKAQKSTRKWMCIAIIILLAVIAIVLTSVLKPWTNKRGA | 305 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco06g1345 | 305 | CDD | SNARE_syntaxin1-like | 203 | 265 | - | - | |
| Acco06g1345 | 305 | Coils | Coil | 133 | 153 | - | - | |
| Acco06g1345 | 305 | Pfam | SNARE domain | 241 | 292 | IPR000727 | - | |
| Acco06g1345 | 305 | Coils | Coil | 41 | 61 | - | - | |
| Acco06g1345 | 305 | FunFam | Syntaxin 132 | 197 | 297 | - | - | |
| Acco06g1345 | 305 | SMART | tSNARE_6 | 199 | 266 | IPR000727 | - | |
| Acco06g1345 | 305 | SUPERFAMILY | t-snare proteins | 33 | 259 | IPR010989 | GO:0016020|GO:0016192 | |
| Acco06g1345 | 305 | Gene3D | - | 197 | 297 | - | - | |
| Acco06g1345 | 305 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 204 | 266 | IPR000727 | - | |
| Acco06g1345 | 305 | SMART | SynN_4 | 29 | 155 | IPR006011 | GO:0016020 | |
| Acco06g1345 | 305 | PANTHER | SYNTAXIN | 39 | 284 | IPR045242 | - | |
| Acco06g1345 | 305 | CDD | SynN | 34 | 191 | IPR006011 | GO:0016020 | |
| Acco06g1345 | 305 | Gene3D | - | 34 | 162 | - | - | |
| Acco06g1345 | 305 | Pfam | Syntaxin | 37 | 239 | IPR006011 | GO:0016020 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco06g1345 | Acco-ChrAcco06 | 9352526 | 9356564 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco06g1345 | 1 | 305 | SNARE and Associated Proteins | AT3G03800 | 68.627 | 3.05e-145 | 409 |