Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1321 ATGCCCATGGCTCTGAGGAGTAGAAAGGAGCGAGAGGCCATGAAAGGGAGGAAAAAGAAGAGGCGCCAGATTTGTTTCCCGCCACTCTGCCCTCCATACAGACTCCCAAGGAGCTTCTCTCGCTCGTCAGTGTCTGTCCAGGCGAAGGTAGAGAAAGATCAGATCATGTTGTGGGTAGACAAGTATCGCCCTAAAACCCTCGACCAAATTACTGTCCACGAAGAAGTCGCCCAAAATCTTAAGAAACTGGTGACGGAGCAGGATTGCCCGCATTTGCTATTCTATGGCCCTCCTGGGTCCGGCAAAAAAACCCTAATCATGGCTCTTCTCCGACAAATGTTTGGGAACGGTGCTGAGAAGGTGAAGGTGGAAAATAGGACATGGAAAGTGGATGCTGGGAGCAGATCTATTGATATAGAGCTGACAACATTAGCAAGTGCCAATCACATAGAAATGAGTCCCAGTGATGCAGGCTTTCAGGATAGATATGTTGTTCAAGAAATAATTAAAGAAATGGCTAAAAATAGACCAATTGATACCAAGGGGAAGAAAGGATTTAAAGTACTACTGCTCAATGAGGTTGACAAACTCTCTAGAGAAGCTCAGCATTCTCTGCGCAGAACAATGGAAAAATACAGTGCTTATTGCAGGTTGATTCTATGTTGCAATAGTTCTTCAAGAGTTACAGAAGCAATCCGCTCTCGCTGTCTAAATGTGCGAATAAATGCACCAAGTGAAGAACAGATAGTTAGAGCATTGGAGTTCATTGGTAAGAAAGAAGATCTGCAACTTCCTTCTGGGTTTGCGGCTCGCATAGCAGAGAAATCAAATCGGAACTTAAGGCGGGCCATATTGTCTCTTGAAACTTGCCGTGTCCAACAGTATCCTTTCAGTAGCAGGCAAACAATACCACCAATGGATTGGGAGGAATATATTTCTGAAATTGCGTCTGACATAATGAAGGAACAAAGCCCGAAAAGGTTGTTTCAAGTTCGAGGGAAGTTGTATGAGCTCTTAATCAACTGTATCCCTCCCGATATCATCTTGAAGAGGCTTCTTTATGAACTGTTGAAGAAACTGGATGCAGAATTAAAGCTTGAGGTCTGCCATTGGGCGGCATATTATGAACATAGAATGCGTCTTGGACAGAAGGCCATCTTCCACCTGGAAGCGTTTGTGGCTAAATTCATGAGCGTTTATAAGGCCTTCCTAATTGCTACATTTGGCTGA 1230 0.4423 MPMALRSRKEREAMKGRKKKRRQICFPPLCPPYRLPRSFSRSSVSVQAKVEKDQIMLWVDKYRPKTLDQITVHEEVAQNLKKLVTEQDCPHLLFYGPPGSGKKTLIMALLRQMFGNGAEKVKVENRTWKVDAGSRSIDIELTTLASANHIEMSPSDAGFQDRYVVQEIIKEMAKNRPIDTKGKKGFKVLLLNEVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSRCLNVRINAPSEEQIVRALEFIGKKEDLQLPSGFAARIAEKSNRNLRRAILSLETCRVQQYPFSSRQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPDIILKRLLYELLKKLDAELKLEVCHWAAYYEHRMRLGQKAIFHLEAFVAKFMSVYKAFLIATFG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1321 409 Gene3D - 55 244 IPR027417 -
Acco06g1321 409 Gene3D - 245 303 - -
Acco06g1321 409 SMART AAA_5 88 247 IPR003593 GO:0016887
Acco06g1321 409 FunFam replication factor C subunit 3 245 303 - -
Acco06g1321 409 Gene3D - 307 400 - -
Acco06g1321 409 CDD AAA 74 245 - -
Acco06g1321 409 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g1321 409 CDD HLD_clamp_RFC 244 312 - -
Acco06g1321 409 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 58 393 - -
Acco06g1321 409 FunFam Replication factor C subunit 5 55 244 - -
Acco06g1321 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 294 IPR027417 -
Acco06g1321 409 FunFam Replication factor C subunit 3 307 400 - -
Acco06g1321 409 SUPERFAMILY post-AAA+ oligomerization domain-like 306 401 IPR008921 GO:0003677|GO:0006260
Acco06g1321 409 Pfam DNA polymerase III, delta subunit 73 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1321 Acco-ChrAcco06 9141908 9145783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1321 56 409 Core DNA Replication Machinery Family AT5G27740 83.333 0.0 649