Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1309 ATGGAGGATCAGGGTTGTGTGAGAAGTGAGAGAGTGACAGTAAGATCAAGATGGACTCCGAAACCGGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGCGGCACCGTCAATCCCTCCAAGGATGAGACTGTCAGAATCAGAAAGCTTATCGAGAAATTCGGCACCGTCGCCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGTTGCAGCAGCTCGCGGCTGAAGCCCTTCATCACCACCAGCCGAATGATCACCAGGTTGATGGCGGTGCAAGTAGTGCAAGTCCGTCTCTATATCACCATCATCATCAGAGTAACCCTGCCTCTGATTCTTGTGCAGCTATGGCGGCGTATAATGGCAGCTGCTCCTCGTCTTATCTCGCTTACCAGGAACCAACGGATCATCATGCTTTCTTTTTCTCTGGTGACCACATGGGTTTCCCCGAAATTGATCATACTTCTGATTTTAACTTCCTTTCTGGGAGCATGACGGTGTTTATCAATGGGGTTGCAACGGAGCTTCAGAGGGGACCTATCGACGTGAAGAGTATGTTTGGTGAAGATGTGATGTTAGTTCATTCTTCGGGAGTTCCACTTCCTACCAATGAGTTTGGCTTCTTAATGCAGGATTTGCAGCACGGTGAAAGCTACTTTCTGGTTTCAAAGGCAGCATAA 708 0.5 MEDQGCVRSERVTVRSRWTPKPEQILILESIFNSGTVNPSKDETVRIRKLIEKFGTVADANVFYWFQNRRSRSRRRQRQLQQLAAEALHHHQPNDHQVDGGASSASPSLYHHHHQSNPASDSCAAMAAYNGSCSSSYLAYQEPTDHHAFFFSGDHMGFPEIDHTSDFNFLSGSMTVFINGVATELQRGPIDVKSMFGEDVMLVHSSGVPLPTNEFGFLMQDLQHGESYFLVSKAA 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1309 235 Gene3D - 15 84 - -
Acco06g1309 235 CDD homeodomain 15 70 IPR001356 GO:0003677
Acco06g1309 235 SMART HOX_1 13 80 IPR001356 GO:0003677
Acco06g1309 235 MobiDBLite consensus disorder prediction 91 116 - -
Acco06g1309 235 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Acco06g1309 235 MobiDBLite consensus disorder prediction 97 116 - -
Acco06g1309 235 PANTHER WUSCHEL-RELATED HOMEOBOX 11 11 233 IPR044558 GO:0003700|GO:0048830
Acco06g1309 235 FunFam WUSCHEL-related homeobox 11 15 82 - -
Acco06g1309 235 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Acco06g1309 235 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1309 Acco-ChrAcco06 9013370 9015008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1309 14 231 Wox Gene Family AT3G03660 51.489 9.62e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco06g1309 Homeodomain 2.8e-13 CL0123