Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1308 ATGAGTATTTCACAAAACTTCGCCAATGGGGGTGGTGGTTTCAGTGGGGACGTCAATCTTTTACCCCCAGTTCCTTATGTCTCCCCTCTTCTGGTTCGAACTCCTCCGCTTTCACTGTCAAACACTTTTGGTCAGACAAGTGGCGAGATTGGTTTTCGGATTCTGAGCCCTTCATTTCCGTCCCAGGAGAGCAGGGGAAATATGAAAGGCCACGGTGGAGCTGATGAACCTTCAGGAGTTAAGAACAAGAGCTTGCCTTTCAAACTTGGCGAGGAGGACACTGAAGCTAAGAGACCTTCTGGCTCGAGAAATGGACACACAAAGCTCTGTTCTCGAGGCCATTGGAGGCCAGCTGAAGATGCCAGACTCAGAGAGCTTGTAGCTCAGTACGGACCTCAAAATTGGAACTTGATCGCCGACCATCTCGAAAGAAGATCAGGGAAGAGTTGCAGACTGAGGTGGTTCAATCAGCTGGATCCCAGAATTAACAGGAGGGCGTTCTCCGAGGAAGAAGAGGGGAGATTGTTGTCTGCTCATAGAATGTACGGAAACAAATGGGCTACGATCGCCAAACTGTTTCCTGGGAGGACGGATAATGCAGTGAAGAACCACTGGCACGTGATAATGGCCAGGAAGCTCAGAGAGCTATCAAGTGGTTGTAGGAGGAGGAGGTTTTGTTCTGCAATCATCCATCCAAAGGCTTTAAATTTAACACTCTCAAATAATGCAGTGAGTGAATCCACCAACCCCAGCAACCTCATAGACGAATCTGCCTCATCCTCCACCGATCTCTCCCTCAGCCCCTCATTTTTCCCAAACCCAAGTCCCCAAGGTCACGGATCACCAATGGGTCTGTGCAATGAGATGAAGCTGATAACTGGGGATGTGGGATTCGAAAGGTTGTTCATGGGTTGGAGTGAAGGAGGAGAACAAATGGGGAAGGTGATGGGTGGAGTGGAGCAATCAAATTCAGACTCGAACTCAGAGATATCAGTATCTGAGTCAGTGACCACAAACAGGACGAACATCTCAATTTGTGGGGAAAGTGAGAACGTGGGTGATAACCTTAACTTGCCATTCATTGATTTCCTTGGAGTAGGAGCTGTATGA 1110 0.4847 MSISQNFANGGGGFSGDVNLLPPVPYVSPLLVRTPPLSLSNTFGQTSGEIGFRILSPSFPSQESRGNMKGHGGADEPSGVKNKSLPFKLGEEDTEAKRPSGSRNGHTKLCSRGHWRPAEDARLRELVAQYGPQNWNLIADHLERRSGKSCRLRWFNQLDPRINRRAFSEEEEGRLLSAHRMYGNKWATIAKLFPGRTDNAVKNHWHVIMARKLRELSSGCRRRRFCSAIIHPKALNLTLSNNAVSESTNPSNLIDESASSSTDLSLSPSFFPNPSPQGHGSPMGLCNEMKLITGDVGFERLFMGWSEGGEQMGKVMGGVEQSNSDSNSEISVSESVTTNRTNISICGESENVGDNLNLPFIDFLGVGAV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1308 369 PANTHER MYB PROTEIN-RELATED 112 265 - -
Acco06g1308 369 SUPERFAMILY Homeodomain-like 112 205 IPR009057 -
Acco06g1308 369 CDD SANT 115 156 IPR001005 -
Acco06g1308 369 Gene3D - 165 224 - -
Acco06g1308 369 Gene3D - 112 163 - -
Acco06g1308 369 SMART sant 163 211 IPR001005 -
Acco06g1308 369 SMART sant 111 160 IPR001005 -
Acco06g1308 369 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Acco06g1308 369 MobiDBLite consensus disorder prediction 86 102 - -
Acco06g1308 369 CDD SANT 166 206 IPR001005 -
Acco06g1308 369 Pfam Myb-like DNA-binding domain 115 175 - -
Acco06g1308 369 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Acco06g1308 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 158 IPR017930 -
Acco06g1308 369 MobiDBLite consensus disorder prediction 56 112 - -
Acco06g1308 369 FunFam MYB transcription factor 112 163 - -
Acco06g1308 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 213 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1308 Acco-ChrAcco06 9007385 9008694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1308 61 369 MYB Transcription Factor Family AT1G69560 41.720 2.08e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g1308 Myb_DNA-bind_6 1.3e-15 CL0123