Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1292 ATGGATCATTACAATGTTCTAGGTTTGCAAAGGAACGCTCCCAAAGAAGAAATCAAAGCGGCTTTCAAGAAATTGGCCTTCCAGTTCCACCCAGACAAGCATTCGCAGTCGCCCAAGGTCGTTAGGGAAAATGCCACTCTCAAATTCAAGCAAATCTCCGAGGCTTATGAAATCCTCATGGATGATCGGAAGCGTGCGGACTACAATATACGATCGCGGGCTGGCGCCGGAAGAAGTGGTTTCTCTGCCGGTGGGAGCAGCGGTCACAAAAATTATTACTACTATAGTTATAACTATGGTGGGAAAGGAAGCACTTACAATTACAATCCTAGGTATAAATCTGGGTCTGGCTTTAGCGTTGACGGCATGGCGTCCAAGTTTGAGTCTGCTCTTCGTTTTCTGACTACGCGCGCTTTTCTCCTCAATCTTGGCTTTGCTGGAGCCTTTTTAGGAGGGATTGTCATTATTGATTCAGGCAAAGAAGCCATATGGAAGATGCAAAATTCAGGGAAATCATTTGAAGAAGCCATGGAGACAATTCAGAAAGCGAAGGGTGAGAGACGATGA 567 0.4568 MDHYNVLGLQRNAPKEEIKAAFKKLAFQFHPDKHSQSPKVVRENATLKFKQISEAYEILMDDRKRADYNIRSRAGAGRSGFSAGGSSGHKNYYYYSYNYGGKGSTYNYNPRYKSGSGFSVDGMASKFESALRFLTTRAFLLNLGFAGAFLGGIVIIDSGKEAIWKMQNSGKSFEEAMETIQKAKGERR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1292 188 FunFam DnaJ domain protein 1 88 - -
Acco06g1292 188 CDD DnaJ 2 61 IPR001623 -
Acco06g1292 188 PRINTS DnaJ domain signature 4 22 IPR001623 -
Acco06g1292 188 PRINTS DnaJ domain signature 44 64 IPR001623 -
Acco06g1292 188 PRINTS DnaJ domain signature 22 37 IPR001623 -
Acco06g1292 188 PRINTS DnaJ domain signature 64 83 IPR001623 -
Acco06g1292 188 Gene3D DnaJ domain 1 84 IPR036869 -
Acco06g1292 188 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Acco06g1292 188 Pfam DnaJ domain 2 69 IPR001623 -
Acco06g1292 188 SUPERFAMILY Chaperone J-domain 1 75 IPR036869 -
Acco06g1292 188 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Acco06g1292 188 PANTHER CO-CHAPERONE PROTEIN DJLA 4 107 - -
Acco06g1292 188 SMART dnaj_3 1 64 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1292 Acco-ChrAcco06 8894808 8896614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1292 3 69 C2H2 Transcription Factor Family AT1G74250 37.313 4.93e-11 58.9