Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1284 ATGTTGCCTTACCATCTTCTCCTTCGGATTCTCGCGTCTAATTTCGTCTTTGGAGTCAGTATAACTATGTATCACGCAAAGAAGTTCCCCCCGGGAACTGTCGTGCCAAATAAAGCTCAAGGTGGTGCTGAGCAGCTTGCGAGTATAGCGGATTTGAGTGGATCTGCTGTAAAAAATGCCACGCCTGTAGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACGCAACTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTACTGCGGGTTATGGGCGTACCTGGACTCACAATTTATCATGTTAAAAGCCATCTACAGAAATACCGCCTTGCAAAGTACCTGCCAGAGTCTTCAGCTGACGATTCTAAGGATGAGAAAAGGAATTCTGGAGACACTGTATCTGGCACAGATTCTTCCCCGGGATTGCAAATCACTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGCCTCCATGAACAGCTAGAGGTCCAAAAGCAGTTACAGATGAGAATTGAAGCACAGGGTAAATATTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGAAATAGCTTGAGAGCTTCTGAAACACTACCATCATCAAAAGATGAGCAAGATCCTGCACGGTCAGAACCTTCAGGTGATGATGCCTCTGCAGAGTCAGAGTCTCCGTTGAAGAAACAGAGAGTTGATGATGGCTCCAAGAGTGTCATCTTGACCCTCCCAGCTACCAGCAAAGATTGCACAGAAGATTGA 795 0.4692 MLPYHLLLRILASNFVFGVSITMYHAKKFPPGTVVPNKAQGGAEQLASIADLSGSAVKNATPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADDSKDEKRNSGDTVSGTDSSPGLQITDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNSLRASETLPSSKDEQDPARSEPSGDDASAESESPLKKQRVDDGSKSVILTLPATSKDCTED 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1284 264 NCBIfam myb-like DNA-binding domain, SHAQKYF class 68 123 IPR006447 GO:0003677
Acco06g1284 264 SUPERFAMILY Homeodomain-like 67 122 IPR009057 -
Acco06g1284 264 FunFam Myb family transcription factor 67 125 - -
Acco06g1284 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 125 IPR017930 -
Acco06g1284 264 MobiDBLite consensus disorder prediction 128 143 - -
Acco06g1284 264 MobiDBLite consensus disorder prediction 203 264 - -
Acco06g1284 264 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 67 235 IPR044848 GO:0003700
Acco06g1284 264 Gene3D - 67 126 - -
Acco06g1284 264 MobiDBLite consensus disorder prediction 128 155 - -
Acco06g1284 264 MobiDBLite consensus disorder prediction 212 246 - -
Acco06g1284 264 Pfam Myb-like DNA-binding domain 71 121 IPR001005 -
Acco06g1284 264 Pfam MYB-CC type transfactor, LHEQLE motif 154 200 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1284 Acco-ChrAcco06 8858156 8861890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1284 64 219 G2-like Transcription Factor Family AT4G28610 54.487 1.96e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g1284 Myb_DNA-binding 2.5e-06 CL0123