Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1276 ATGGGGCGGATTATGCTGCTCGTATCAGACTTCGTTTTGTCATTCATGTGGGTATGCTCCGGGGTTCTGATTAAGATGGGCGTAAACAAATATCTGGGTTTGATGAGTCGTGGGCCACTTCGTGAGATCGTGAAGATTGCGACCGTCATTGCTAACATGTTCTTCTTTACATTCCTCCGAATCATTACCCGTGGCGGCGCCTACAATCCACTCACTGTTTTGGCCGGTGCCATTTCTGGAGATTTCAGCAAATTCCTCTACTGCTTTGCTGCTAGAATTCCTGTTCAGGTGATTGGATCTATTATTGGGGTTAGGCTTATGATTGATACCTTTCCGGAAGTAGGACGCGGACCACGTTTGAATATTGACATTCATCGAGGTGCTCTAATAGAAGGAATCCTAACATTTGCAATTGTTTCCATATCACTTCGGCTAGCTACAAAAATTCCCGAAGGCTTCTTCATGAAGACTTGGATCTCCAGTGTCTTCAAGCTAGCCCTTCACGTACTTGGTTCTGACCTAACTGGTGGTTGTATGAACCCAGCCTCTGTAATGGGGTGGGCTTTTGCTCGAGGAGATCACATGACCAAGGAACACTTCGTTGTATACTGGCTTGCCCCTATGAAAGCCACTGTACTGGCAGTATGGACATTCAAATTGCTAGTTCGGCCTGTAAAAGAAGACAAATCAATCACAAAAAATAAATTAGAATGA 714 0.4482 MGRIMLLVSDFVLSFMWVCSGVLIKMGVNKYLGLMSRGPLREIVKIATVIANMFFFTFLRIITRGGAYNPLTVLAGAISGDFSKFLYCFAARIPVQVIGSIIGVRLMIDTFPEVGRGPRLNIDIHRGALIEGILTFAIVSISLRLATKIPEGFFMKTWISSVFKLALHVLGSDLTGGCMNPASVMGWAFARGDHMTKEHFVVYWLAPMKATVLAVWTFKLLVRPVKEDKSITKNKLE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1276 237 Gene3D Glycerol uptake facilitator protein. 4 235 IPR023271 -
Acco06g1276 237 SUPERFAMILY Aquaporin-like 5 231 IPR023271 -
Acco06g1276 237 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Acco06g1276 237 Pfam Major intrinsic protein 7 217 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1276 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1276 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1276 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1276 237 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Acco06g1276 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1276 Acco-ChrAcco06 8809793 8811126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1276 1 237 Major Intrinsic Protein MIP AT3G56950 57.806 9.38e-99 286