Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1260 ATGGACATATCAACGGCATTGTCTTCTCTGGTTTCCACTCTCCAAAACGAAGAGAATTTCAAAGAAGTGACTGATTTCCCTGAGACTCAAATCGGAAACGAGGGCCTCACGAAACGCATCCTCAAAACAGGACTCTCATGGCAAACTCCATCTCCTGGAGACCAAGTCCAAGTTCATTTCAGAGGTCAGGTTCTGAATGGAGCATCCCTTGAATCAAGTTACGATCAAGGGACCCCATTTCGCTTCAACTTAGGCCAATGTGAAGTTATCAAAGGCTGGGATGAAGGAGTTGCCACCATGAAGAAGGGAGAGAGAGCATTCTTCAAAATACCACCAAACTTGGCGTATGGGGAGAAAGGTTCTCCGCCATTGGTTCCTCCCAATGCAACTCTCATCTTTGAGGTTGAGATGCTGTCTTGGATTACCGTCAGGGACTTGACTGGTGATGGAGGAATCCTGAAAAAGATAACAAAGGAGGGAGAGGGATGGGAGACTCCTAGAGACGCCGACGAGGTCTTAGTGAAATATGAAGCAAGGCAAGAGAATGGAATGCTTGCTCATAAGTCTAATGAAGGTGTAGGTTTTACTATAAGTGATGGCCATCTTTGTCCTGCCATGAGTATAGCATTGAAAACAATGAGAAAAGGGGAGGAAGCAGAGCTCAGTTTAAGATTCTTTTATGGCATGATACAAAATTCAAGTAGAAACAGTGAAACCAATGGCAGTGCCCAACCAGATTCTAATTTAACAAGTCTAAGTCTAGAGCTGGTATCATGGAAAACTGTAGTTGATGTCACAGGAGATAAGAAGATACTCAAGAAGATTGAGAAAGCTGGAGAGGGATTTGAGCGTCCTAATGAAGGATCACAAGTGAAAGTAACGTATACCAGTAAACTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAAGAAGAACCTTTTGAGTTCACAACTCAGGAAGAACAAGCACCTGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGAAAGCCACCGTGTCCGTTACCGCCGAATATTTATCTGATAAAATTAATCTTCCCACCACCCCAGCTAATAAAGTCCTTTATTATGAGGTCCAGTTGGTTGATTTCATCAAGGAGAAGCCATTTTGGAAAATGAATTCTCAGGAGAAAATAGAAGCTGGTGAGAGGAAGAAGCATGACGGAAATTTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCATCCAACAAATATGAAAAGGCTATAAAATGCATAGAGTTTGATCACTCATTCAGTGATGATGAGAAAAGCCAAGCCAATGCTTTACGGATATCTTGTTATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAGTATACTGAAGCCTCAAAATTCTGTACTCAGGTTCTGGAACAAGATCCATTAAATGTGAAGGCGCTGTACAGAAGATGCCAGGCATACCTGAAAACATCAGACTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCCCTCACTATTGATCCAAACAACAGAGACATGAGAGTGGAGTACAGGGAGCTGAAACTTAAGCAAAAGGAATACAGTAAATATGAAGTTGACATCTTAAGCTCAATGCTGTCAAAGATGGGCTAA 1626 0.4194 MDISTALSSLVSTLQNEENFKEVTDFPETQIGNEGLTKRILKTGLSWQTPSPGDQVQVHFRGQVLNGASLESSYDQGTPFRFNLGQCEVIKGWDEGVATMKKGERAFFKIPPNLAYGEKGSPPLVPPNATLIFEVEMLSWITVRDLTGDGGILKKITKEGEGWETPRDADEVLVKYEARQENGMLAHKSNEGVGFTISDGHLCPAMSIALKTMRKGEEAELSLRFFYGMIQNSSRNSETNGSAQPDSNLTSLSLELVSWKTVVDVTGDKKILKKIEKAGEGFERPNEGSQVKVTYTSKLEDGTIIERKGSEEEPFEFTTQEEQAPEGLEKAIMTMRKGEKATVSVTAEYLSDKINLPTTPANKVLYYEVQLVDFIKEKPFWKMNSQEKIEAGERKKHDGNLLFKAEKFRRASNKYEKAIKCIEFDHSFSDDEKSQANALRISCYLNNAACKLKLGEYTEASKFCTQVLEQDPLNVKALYRRCQAYLKTSDLEKAEADIKRALTIDPNNRDMRVEYRELKLKQKEYSKYEVDILSSMLSKMG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1260 541 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 288 375 IPR001179 GO:0003755
Acco06g1260 541 ProSiteProfiles TPR repeat profile. 475 508 IPR019734 GO:0005515
Acco06g1260 541 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 169 260 IPR001179 GO:0003755
Acco06g1260 541 FunFam Peptidyl-prolyl cis-trans isomerase 28 141 - -
Acco06g1260 541 SUPERFAMILY FKBP-like 264 394 - -
Acco06g1260 541 Gene3D - 145 260 IPR046357 GO:0003755
Acco06g1260 541 Gene3D - 261 377 IPR046357 GO:0003755
Acco06g1260 541 Gene3D Tetratricopeptide repeat domain 378 532 IPR011990 GO:0005515
Acco06g1260 541 SUPERFAMILY FKBP-like 146 227 - -
Acco06g1260 541 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 164 236 IPR001179 GO:0003755
Acco06g1260 541 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 284 372 IPR001179 GO:0003755
Acco06g1260 541 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 138 IPR001179 GO:0003755
Acco06g1260 541 FunFam Peptidylprolyl isomerase 380 534 - -
Acco06g1260 541 SUPERFAMILY TPR-like 383 530 IPR011990 GO:0005515
Acco06g1260 541 Pfam Tetratricopeptide repeat 475 508 IPR001440 GO:0005515
Acco06g1260 541 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 141 IPR001179 GO:0003755
Acco06g1260 541 SMART tpr_5 392 425 IPR019734 GO:0005515
Acco06g1260 541 SMART tpr_5 475 508 IPR019734 GO:0005515
Acco06g1260 541 SMART tpr_5 441 474 IPR019734 GO:0005515
Acco06g1260 541 Gene3D - 11 144 IPR046357 GO:0003755
Acco06g1260 541 SUPERFAMILY FKBP-like 23 143 - -
Acco06g1260 541 PANTHER PEPTIDYLPROLYL ISOMERASE 28 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1260 Acco-ChrAcco06 8688673 8692628 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1260 28 540 Calmodulin-binding Proteins AT5G48570 54.038 0.0 571