LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1259	ATGGAAGGGAATGGATATGGATGTTGTGTTTGTGAGAGCGCTGTGGATAGGTTTAAGGTCTACATAGCCATGATTTCTCTGCAATTTGGCTATGCCGGCATGAGCATCATCACCAAGGTTTCCCTCAACCGAGGTATGAGTCACTATGTTCTTGTCGTTTACCGTCACGCCTTCGCCACCGCCGCCGTTGCTCCCTTCGCTCTTGTTCTCGAGAGGAAAGTGAGGCCCAACATCACCTTCCCCACTGCCATCCAAATTTTCATTCTCGGACTTCTTGGGCCTGTGATTGATCAGAATCTGTTCTTCGCTGGGTTGAAGTTCACTAGCCCAACCTACTCATGTGCTGTAAGCAACATGCTTCCCGCAATGACATTTCTCATGGCAGTTATCTGCAGGATGGAGAAGGTAAACATCAGAAAATTTAGATGTCAGGCAAAGGTTATTGGGACGATATTCACAGTTTCTGGAGCTATGTTAATGACTTTGTACAAGGGCCAAGTCATCAACTTTTTCTGGTACATGCATCACCCTAGAGACTATACTCCTACGACGGCCATTGATTCAGGGGGAAAACATTGGTTTAAGGGTTCTGTTCTTCTCATAATTGCGACCTTTGCCTGGGCTTCTTTCTTCATCCTTCAGACTGTGACGTTACGGACATATCACTCGGCTCCGCTCTCGCTCACTTCACTGGTGTGTTTCGTGGGTACGCTCCAGTCTATTGCGGTCACGCTTGTGATGGAACACAAGCCCTCTGTTTGGAGCATTGGGTGGAACATGAATCTGTTAGCCGCGGCCTACGCTGGTATAGTGTCAACGGCCATTGCATACTACGTTCAAGGGGTTGTGATGCAGAAAAGAGGCCCTGTTTTTGTGACTGCTTTCAGCCCTTTGATGATGATTATTGTAGCTGTCATGGGCTCTTTCATCCTGGCCGAAAACATCTACCTTGGAGGAGTGATAGGAGCTGTGCTGATCGTGGTGGGTCTGTACTCAGTTCTATGGGGAAAATACAAGGAGGACAGGGAGAAAGAAGAGGCAGAGGTAATACAAGGGTGTACAGAAGAAAATGGAAGGTTGGCACAAGTGAAGGAAGATATTGAAGCGAACCCAATTGAGATGCAAAAGGTTGAAGATCGATCCTGTAGTAATAGCCATTAG	1161	0.472	MEGNGYGCCVCESAVDRFKVYIAMISLQFGYAGMSIITKVSLNRGMSHYVLVVYRHAFATAAVAPFALVLERKVRPNITFPTAIQIFILGLLGPVIDQNLFFAGLKFTSPTYSCAVSNMLPAMTFLMAVICRMEKVNIRKFRCQAKVIGTIFTVSGAMLMTLYKGQVINFFWYMHHPRDYTPTTAIDSGGKHWFKGSVLLIIATFAWASFFILQTVTLRTYHSAPLSLTSLVCFVGTLQSIAVTLVMEHKPSVWSIGWNMNLLAAAYAGIVSTAIAYYVQGVVMQKRGPVFVTAFSPLMMIIVAVMGSFILAENIYLGGVIGAVLIVVGLYSVLWGKYKEDREKEEAEVIQGCTEENGRLAQVKEDIEANPIEMQKVEDRSCSNSH	386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1259	386	Pfam	EamA-like transporter family	195	334	IPR000620	GO:0016020
	Acco06g1259	386	Pfam	EamA-like transporter family	20	161	IPR000620	GO:0016020
	Acco06g1259	386	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	54	163	-	-
	Acco06g1259	386	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	234	339	-	-
	Acco06g1259	386	PANTHER	WAT1-RELATED PROTEIN	21	345	IPR030184	GO:0016020\|GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1259	Acco-ChrAcco06	8681780	8683308	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1259	11	381	Nodulin-like Gene Family	AT5G07050	62.269	4.61e-166	469