LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g1254	ATGGCTGACCCATCACCATCTCCTGATACGAGTTCTGTTGATTTTACTGAGCTGATCGATAGCCTCCCTTCACAACCTATGGATTCTCTCCTTTTCGCCGGTGATGACGATGATGCCTTGTTTTCTGAAGCATTTCCCTCCGATTTTGACTTTTTAGGGTTGGATGGCGATTTCGAGATTAACTTGGACGATCTTCCCTTTAATGTTGACGAATTCCTTTTCGACGACGCATGTGTTATTCCTCCCTCGCAGTTGCAGATCAATGATGATCGTCATGGCGTCGCTAATTGCGATAGCAGTCTGACTTCCGACGTCGCCAGGTTTTCGAATTCGCAGTCTCATCCGCCTCCTTGTTTAGATAATTCAAGCGATCAGAACCTGCATGCCTCAAATGAGGCTAAACTTTCGAACTTCCAATCGCCGGAGTCTGATTCTTGCGACCGGGAATCATCGGGTGGGCCCGTTTCATCTCAGGGTTCGGCTAACAGAGGGTCAGGTGTTTCTGATGCCACGAACTCACCTTCACCGACCCGATACGACAGAGATTTTACATCTCAGGTTATTATTGATGAGAACCTAAAGTTGGATGAAATTGGGAAGGGCTCTGATTTGAAGAGGAAGATGGGAAAAAATGGAGTAAATGCTGAGGCAAGAACTACTAAGCACCGGAGGTCGTCAATGCCTGTGGAGAATGCTACTCGAAAACCTGTTGTTAGTGTTATTAATGAGGACGACGAGAAAAAGAAGGCTAGGTTGCTGAGGAATCGGGAAAGTGCCCAGCTTTCTAGGCAGAGAAAGAAGCGGTATGTGGATGAGCTTGAGGAGAAGGTAAAATCGATGCATTCGACCATTTCCGATTTGAGTAGCAAGATATCATTTTTCATGGCCGAGAATGCCACTTTAAGACAGCAATTGAGTGCTGGTGGAATGTGTCCACCGCCTCCTGCTCCGGGCATGTACACCCATCCTCCGATGCCTACAATGCCTTATTCTTGGGTGCCGTATGCCCCCTTCGGTGCTAACCCACTAGGGCCCAAGGTTCCTTTGGTACCAATTCCGAGATTGAAGTCTCAGCAACCGGCATTGGCCTCAAAGAGTAAAACGTCTGAGCGTAAGAAATCTGAGGGTAAAACTAAAAAGGTTGCCAGTGTCTGTTTTTTGGGTTTGTTATTCTTTGTCTTACTTTTTGGTGGATTGGCTCCCCTTGTGAATGTTAAGTTTGATGGTTTAGTGGACGATACTTATGGGAGGTCGCAGTATGTTAGCGATAGATTCTATGGTCAGCTCGGAGGGAAAGTCTGGCCCGTAAATGGTCCTATGAATAGGTCTGAAGGATACAAAGGAGCAGGACCTTCCAGTGAATTTGTTCATCTGGGCAATACTAGTCAGCCTCTTTTTGCTTCTTTGTATGTTCCTAGGAATGACAAGATGGTGAAGATTGATGGGAATTTGGTAATCAATTCTGTCTTGGCCAGTGAGAAAGCTATGGCATCTCAAACTGCTCATATTGCAAACAATGATAGAAGAGAAACTGGCTTGGCAATTTCTAAATATTGGGATTCTGCATTGGCTATTCCGGAAGTTGGAATAAATAGAGGTTCACATCCTTACTCGTATAGGAGTCCGCCTGAACAGAGGAAGGCACTTCCAGATGGTTCAGCTCAAATTTTGGAGGACCATCTGAAGTTAACTGCACCTGATGGTAAAATCCAACAGTTGTTCCTGGAAGGTCTTGCAGGGCCCATGTTAAGTTCTGGCATGTGCACAGAAGTTTTCCAATTTGATATTTCATCAAGACAAGGAGCTATTGTGGCAGCATCATCAGCAGGCAATGTTTCTGAAGAGAACCATCAGAATGCTACTCGTGTGAGCAAAAGTAGAAATAGAAGAATTCTCCATAGGTTCCCAGTTGGCGGATCCAGTAGCAACGCAAGTGGAGAACAAGGAGGAGGAAATCCACTGAATGACAACTTGCTTGGTAACAGGTCCAAGTCTTCCATGGTGGTTTCTGTGCTTGTTGATCCCAAAGAGGCTGCAGATTTTGATGGAATGGTGGCGCCAAAGTCGATTTCTAGAATATTTGTGGTTATGCTTGTGGACAGCATCAAGTACGTAACGTATTCGTGTGTTCTTCCTCACGCTTCTCCCCACCCCCATCGTGTCACTGCTTGA	2172	0.4572	MADPSPSPDTSSVDFTELIDSLPSQPMDSLLFAGDDDDALFSEAFPSDFDFLGLDGDFEINLDDLPFNVDEFLFDDACVIPPSQLQINDDRHGVANCDSSLTSDVARFSNSQSHPPPCLDNSSDQNLHASNEAKLSNFQSPESDSCDRESSGGPVSSQGSANRGSGVSDATNSPSPTRYDRDFTSQVIIDENLKLDEIGKGSDLKRKMGKNGVNAEARTTKHRRSSMPVENATRKPVVSVINEDDEKKKARLLRNRESAQLSRQRKKRYVDELEEKVKSMHSTISDLSSKISFFMAENATLRQQLSAGGMCPPPPAPGMYTHPPMPTMPYSWVPYAPFGANPLGPKVPLVPIPRLKSQQPALASKSKTSERKKSEGKTKKVASVCFLGLLFFVLLFGGLAPLVNVKFDGLVDDTYGRSQYVSDRFYGQLGGKVWPVNGPMNRSEGYKGAGPSSEFVHLGNTSQPLFASLYVPRNDKMVKIDGNLVINSVLASEKAMASQTAHIANNDRRETGLAISKYWDSALAIPEVGINRGSHPYSYRSPPEQRKALPDGSAQILEDHLKLTAPDGKIQQLFLEGLAGPMLSSGMCTEVFQFDISSRQGAIVAASSAGNVSEENHQNATRVSKSRNRRILHRFPVGGSSSNASGEQGGGNPLNDNLLGNRSKSSMVVSVLVDPKEAADFDGMVAPKSISRIFVVMLVDSIKYVTYSCVLPHASPHPHRVTA	723

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	204	229	-	-
	Acco06g1254	723	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	245	308	IPR004827	GO:0003700\|GO:0006355
	Acco06g1254	723	CDD	bZIP_HY5-like	248	299	-	-
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	638	661	-	-
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	635	661	-	-
	Acco06g1254	723	Pfam	bZIP transcription factor	246	305	IPR004827	GO:0003700\|GO:0006355
	Acco06g1254	723	FunFam	bZIP transcription factor 49	246	308	-	-
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	136	182	-	-
	Acco06g1254	723	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	48	717	-	-
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	107	126	-	-
	Acco06g1254	723	SMART	brlzneu	243	307	IPR004827	GO:0003700\|GO:0006355
	Acco06g1254	723	Coils	Coil	256	290	-	-
	Acco06g1254	723	MobiDBLite	consensus disorder prediction	204	231	-	-
	Acco06g1254	723	SUPERFAMILY	Leucine zipper domain	247	305	IPR046347	GO:0003700\|GO:0006355
	Acco06g1254	723	Gene3D	-	245	310	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g1254	Acco-ChrAcco06	8627477	8630544	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g1254	154	723	bZIP Transcription Factor Family	AT2G40950	48.911	1.58e-138	422

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Acco06g1254		bZIP_1	2.4e-11	CL0018