Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1252 ATGAGGGAGTACGACACAAATTGGTTCTCGAGATGGGAAGAGGGACTTCCTTCCCCAGACGAACTCACGCCTCTCTCCCAAACCCTAATCACGCCTGATCTTGCCATGGCTTTCGATATCCAAAACCTACATAGCAATAGCCCTCACCACCAAATCCCTCATCCTCCACCTCCTTCCAACCCCTTACCTTCTCCCGGAAATCCCTCACAGCCCAACTCTGCTGAATTTGCCGATTCCGGGGAGCTGGGTTCTGGAACCGCTGGTGAAGAGCCGGCTCGCACCCTCAAGCGCCCTCGCCTTGTCTGGACTCCACAACTTCACAAAAGGTTTGTGGACGCCGTCGCTCACTTGGGTATCAAAAATGCTGTGCCGAAAACCATAATGCAGCTGATGAGTGTGGACGGGTTGACCCGGGAAAACGTGGCCAGTCATTTGCAAAAATATCGACTTTATTTGAAGCGCATGCAGGGACTATCCGCCGGTGCTTGCGCCGGCAGCGGTGGCAGCGCAGGCGGAGCTGGGTTGGGTGCCTCCTCCGATCCTGCCACTGATCATCTATTTGCAAGCGCCCCTGTGCCGCCCCATTTCTTACATCCTGCAGCTAGGTCCAATTCCGACCATTTCATGCCGTTCGTACCCGTTCCGCCGGCTCTGCAGCATCACCATCACCACCAGCAGCATATGGCAGCGGCTGTGGCCGCCGCCGCCCATCCACAATTGCAGCAACAGTATCACAGACAAGTGAGCCATTTTGGGTCGCCGCCGAATGGGAGCTTCGAGCATCCGATTCTGACAAGGCAGCCTCAACCACTTCATAGGATGGGTCAAGCAATGCAGCACAGTCCAGTACCTGGATATGTAGAGGACATGGAATCGGCTAACGCAGCTGGGGGGAGAAAGGTTCTTACTTTATTTCCAACCGGAGATGATTGA 933 0.5509 MREYDTNWFSRWEEGLPSPDELTPLSQTLITPDLAMAFDIQNLHSNSPHHQIPHPPPPSNPLPSPGNPSQPNSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGACAGSGGSAGGAGLGASSDPATDHLFASAPVPPHFLHPAARSNSDHFMPFVPVPPALQHHHHHQQHMAAAVAAAAHPQLQQQYHRQVSHFGSPPNGSFEHPILTRQPQPLHRMGQAMQHSPVPGYVEDMESANAAGGRKVLTLFPTGDD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1252 310 MobiDBLite consensus disorder prediction 50 68 - -
Acco06g1252 310 Gene3D - 94 156 - -
Acco06g1252 310 Pfam Myb-like DNA-binding domain 101 149 IPR001005 -
Acco06g1252 310 MobiDBLite consensus disorder prediction 1 22 - -
Acco06g1252 310 FunFam Two-component response regulator 93 156 - -
Acco06g1252 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 153 IPR017930 -
Acco06g1252 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Acco06g1252 310 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 5 264 IPR044841 GO:0003700|GO:0006355
Acco06g1252 310 MobiDBLite consensus disorder prediction 44 96 - -
Acco06g1252 310 SUPERFAMILY Homeodomain-like 94 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1252 Acco-ChrAcco06 8617059 8617991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1252 1 310 G2-like Transcription Factor Family AT3G10760 59.155 4.81e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g1252 Myb_DNA-binding 2.3e-08 CL0123