Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1244 ATGAAATCGCAGAGCATTGAGGAGTGGAGAAAATATTTTGAGGGGGGAAACTGTAGCATCTACCGGATCATCACTAATGCAATAAGAGTGGCTGCTTTGGATCAGCCTGAAGAGTTCAAACTCAGAAGAAACAAGATCCTTGAGAAGCTCTACTCTTGCCAATTCACCGGAAATTGCTGCTGCCTTGATCAGACCACGGAACAAGATATTCATACCACCATTTCACAAGTTTTCCAGGACTGCAAAAAAGCATGTCCACATAATGAGACCACTAATAAGGTCGATGATTCATCGGTCGCCGGAGGAGGAGGAGGAGGAAGAGCCACCGGCCAGCAGGCCAATGAACCAGGAAACAACATTATTAAAGATGATCGTGATGAAAATATTCTGTGTGTTTTGCAGATTAAGGATCAACTTGAGAGCAACAAGCTGACGGAAACTGAAATCTACGGGTCACTAAGGAAGCTGCGATCGTTGGTTCGAGCTGTAAGTGTCATAGAGGCTACAAAAATAGGGAGAACAATAAGTAATTTTAGGCAACACAGATCGAAGGAGATCAGTCTTTTAGCTACCATTATGACTGACCAATGGAAGTCCATGATTGCGGAGCTCGTGGATAATAAAACAGCAGAAACCGCTGCAGAGAAATCTAAAAACCCTGCGCCTAGCTCCGTTCTTGAAGAGTGGCGAGAATTTCCTTCGGTTGAATTTGTTCCTCAGCCTCCAGTGGAGTTCTCAGAGAATTTCCTTGATGACATGGATGATTACGAAAATGCTGCTGGTAAAAAGGACAATAATGAGATAAAGTTGAAAACAAAGAAAGACTCGGATGAGAAATTCAAGAGTGGCAGGTCCAATGAACCATCCAACAAAAGCAACGCCAAAGTTGAAAACAGTTCTGGTGCAACGACAGAGAAGAACCCTTCAATGGGAAACAAAAGAAAAATGGAGGACGCAGAATTGGTCACACCCACCATACCCACCATCAAGCACCAGAAACCAGCCAAGTCAGCACCAAACCCTAAACTCCCAAAGACTGAACAGAAGCCAGGGGTGAAGAAAGAGGTCCAAAATCACAATTCTGAGCCTCGTACCAGATACAGAGCCCTTCGTATGAGTGCCGAACCCACCCATGCCATCAGTCCCCGTGCGAGAGAGTTCCTATTTTTAACAGCTAAAAGAGACATCCAGTTGATTCCTGAAGGTGATGTTCACAAGAAATCATCGACTACTAGCGCTCCAAGAATCGGACTCGAAAGTGAAGGCTAG 1269 0.4468 MKSQSIEEWRKYFEGGNCSIYRIITNAIRVAALDQPEEFKLRRNKILEKLYSCQFTGNCCCLDQTTEQDIHTTISQVFQDCKKACPHNETTNKVDDSSVAGGGGGGRATGQQANEPGNNIIKDDRDENILCVLQIKDQLESNKLTETEIYGSLRKLRSLVRAVSVIEATKIGRTISNFRQHRSKEISLLATIMTDQWKSMIAELVDNKTAETAAEKSKNPAPSSVLEEWREFPSVEFVPQPPVEFSENFLDDMDDYENAAGKKDNNEIKLKTKKDSDEKFKSGRSNEPSNKSNAKVENSSGATTEKNPSMGNKRKMEDAELVTPTIPTIKHQKPAKSAPNPKLPKTEQKPGVKKEVQNHNSEPRTRYRALRMSAEPTHAISPRAREFLFLTAKRDIQLIPEGDVHKKSSTTSAPRIGLESEG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1244 422 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 5 356 IPR044805 -
Acco06g1244 422 MobiDBLite consensus disorder prediction 404 422 - -
Acco06g1244 422 MobiDBLite consensus disorder prediction 347 367 - -
Acco06g1244 422 MobiDBLite consensus disorder prediction 256 367 - -
Acco06g1244 422 Pfam TFIIS helical bundle-like domain 153 201 IPR017923 -
Acco06g1244 422 MobiDBLite consensus disorder prediction 400 422 - -
Acco06g1244 422 ProSiteProfiles TFIIS N-terminal domain profile. 127 204 IPR017923 -
Acco06g1244 422 MobiDBLite consensus disorder prediction 256 285 - -
Acco06g1244 422 MobiDBLite consensus disorder prediction 286 309 - -
Acco06g1244 422 MobiDBLite consensus disorder prediction 91 119 - -
Acco06g1244 422 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 213 IPR035441 -
Acco06g1244 422 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 130 202 IPR035441 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco06g1244 Med26 0.00011 No_clan