Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1241 ATGGCATCAAGCTCAATGTCATCTTCAGGGTCATGGTCTGCTAAGGACAATAAGGCCTTCGAGAGGGCTCTGGCAACTTATGACAAGGACACTCCTGACCGTTGGCACAACGTTGCAAAGGCTGTTGGTAGCAAAACTGCTGAGGAAGTAAAGAGGCACTACGATCTCCTTGTGGAGGACGTGAAGCACATTGAGTCAGGACGAGTGCCCTTTCCTAATTACAGGAATACTGAAGACTCTGACCAGGGAAAACGGCTGAAGAACCTGAAGCTTCAGTGA 279 0.491 MASSSMSSSGSWSAKDNKAFERALATYDKDTPDRWHNVAKAVGSKTAEEVKRHYDLLVEDVKHIESGRVPFPNYRNTEDSDQGKRLKNLKLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1241 92 MobiDBLite consensus disorder prediction 68 92 - -
Acco06g1241 92 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Acco06g1241 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Acco06g1241 92 FunFam Transcription factor SRM1 4 71 - -
Acco06g1241 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Acco06g1241 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Acco06g1241 92 CDD SANT 18 54 IPR001005 -
Acco06g1241 92 Gene3D - 2 71 - -
Acco06g1241 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Acco06g1241 92 SMART sant 8 60 IPR001005 -
Acco06g1241 92 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1241 Acco-ChrAcco06 8550121 8550516 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco06g1241 Myb_DNA-binding 1.9e-06 CL0123