Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1224 ATGAAAGGAAGGAGGTGGGGTGGGCCATGGAGGAGAGAGGTGGGAGGTGAATTTGGGAATATGGATGTAGTGGCAACAAAAGTCCAGTGGCGTGTAGAAAATGGGGTGGTTTGTAGAGAAATCAGAAGAGGAGACGAAAAGGCTGAGAAGCCAAGAGGAAAAGGGGGAGTTTCAATTGCCCCATGCCTGATGGGCCCCTCTCTTGTCTCCCTTCTTCCTTCCCTTCCTCTCAACACTATTCCATTTCATGTTCATGGATTCAGACTATCAACTTCACAAGGTTTACTCAAGTCTGGCATATTTCTTCGCAGCCTCTCACTCCGTCTTGCTTCTCCTGTTCTTGTCTACTCAATGGCAAAGCGCTTGGCTCCCTTGCTTAGTCGCGTTTTGGTGGAGAAGATCCTCCCTCCATCCAAAACCAACGCGGGAATCTTGCTGCCAGAAAAATCCAATAAGCTGAATTCTGGAAAAGTTATTGCCGTGGGCCCTGGCATTCGTGATAAAGAGGGAAAGCTAATTCCTGTTGCTGTAAAGGAGGGTGACACTGTCCTTTTACCTGAATATGGAGGATCGGAGGTGAAGCTTGGTGACAAAGACTATTATTTATATCGTGACGAGGATCTACTGGGGACGTTGCATGATTGA 645 0.476 MKGRRWGGPWRREVGGEFGNMDVVATKVQWRVENGVVCREIRRGDEKAEKPRGKGGVSIAPCLMGPSLVSLLPSLPLNTIPFHVHGFRLSTSQGLLKSGIFLRSLSLRLASPVLVYSMAKRLAPLLSRVLVEKILPPSKTNAGILLPEKSNKLNSGKVIAVGPGIRDKEGKLIPVAVKEGDTVLLPEYGGSEVKLGDKDYYLYRDEDLLGTLHD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1224 214 Pfam Chaperonin 10 Kd subunit 122 211 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 CDD cpn10 121 212 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 Hamap Co-chaperonin GroES [groES]. 121 213 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 SUPERFAMILY GroES-like 120 213 IPR011032 -
Acco06g1224 214 PANTHER 10 KDA HEAT SHOCK PROTEIN 118 211 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 Gene3D GroES chaperonin 116 214 IPR037124 GO:0006457
Acco06g1224 214 SMART Cpn10_2 121 212 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 FunFam 10 kDa chaperonin, mitochondrial 115 214 - -
Acco06g1224 214 PRINTS 10kDa chaperonin signature 199 212 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 PRINTS 10kDa chaperonin signature 122 137 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 PRINTS 10kDa chaperonin signature 178 190 IPR020818 GO:0005524|GO:0006457|GO:0044183
Acco06g1224 214 PRINTS 10kDa chaperonin signature 143 164 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1224 Acco-ChrAcco06 8449218 8453971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1224 120 213 Calmodulin-binding Proteins AT5G20720 40.625 9.60e-12 60.8