Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1223 ATGTCAGACACGTGGAATCTTGTGGTTGTTTGGTGGGAATTTTCTAGTAGACAGAAACTCGTTTTTGTTGTGGATATACCTGTAATTGTATGTCAAATCTTATTTTGTAATTCGTATAAAACTGATTTTTATATTTCGGACCTGTGGATATCATCAATGTTTTATAATGAACATGACAATAATGACTCGTTTGCCATGGCTACAACGTTAATATTTGTGGTTCTTGCGCAAATACTCACTTCAGTTACTTCACTGTCCGAAGCTGATAAGATAACTAGTTTGCCAGGGCAGCCACCGGTCAAGTTTAAGCAATACTCTGGTTACATTACCGTTGATGAGAACCGGCACAGAGCTCTATTTTACTATTTTGCTGAAGCTGAAGCAGAACCTGCTTATAAGCCACTAGTTCTCTGGTTAAATGGAGGGCCTGGTTGTTCGTCTGTGGGAGCTGGAGCGTTCGTTGAACATGGACCTTTCAAACCAAGTGGAAACGTTCTCGAGAGAAATGAATATAGTTGGAACAGAGAGGCAAATATGCTCTACGTGGAATCACCGGCCGGTGTTGGTTTCTCATACTCTGCTAATGAATCATTCTATGAATTTGTGAACGATGAAATCACAGCAAGGGACAATCTTATTTTCCTACAACGTTGGTTTTCTAGATTCCCGGAGTACAAAGGCAATGAGTTCTTCATCACGGGGGAGAGCTATGCAGGTCACTATGTACCCCAACTTGCCCAGCTCATTGTTCAAACCAAAACAAAGTTCAATCTCAAGGGGATAGCTCTAGGGAATCCTCTTTTGGATTTTAATACTGATCTAAATTCTAGAGCTGAATTCTTTTGGTCACACGGACTAATATCAGATACAACCTATAACATCTTCAATACCATTTGCAATTTTTCCCAAAATTGGAGACAACATCACAGTGAGACTCCAAGTGTGAGTTGTGCAGAAGCGAATAAACTGTTGACTAGGGAGATTGGTAATTTTGTTAATCCATACGATGTCACTCTCGATGTTTGCGTGTCATCCATAGATCAGCAGGCTCAAACGCTAAATCAACTGCAAGAGACAGCCAAGATAGATGTTTGTTTGGATGATGAAACATCTGCATATTTGAACAGGAAAGACGTGCAGGAAGCTCTCCATGCTAAGCTAGTGGGAATTATCAACTGGTCTGTTTGTAGCGAGGTTCTAAGATATGACTATCAGAATCTAGAAGTACCGACAATTCCTACTCTAGGAGAGCTCGTTAAGTCCGGAGTCCAGGTTCTTGTGTACAGTGGAGATCAAGATTCAGTAGTCCCATTAACCGGAACGCGTTCTCTGGTGAATAAATTGGCCGGGGAGTTAGGACTCAATACAACGGTGCCTTACAGAGCCTGGTTCGCGGGGAGACAGGTTGCTGGATGGACACAAGTTTACGGTAACAATAACGTGCTATCATTTGCCACCATCAGAGGGGCAGCTCATGAAGCTCCATTTTCGCAGCCAGAGAGATCACTCGTGCTATTCAAATCATTGCTCCAGGGAAAGCCCCTTCCAGATGCAGCTCCTTCAATCTAA 1569 0.4238 MSDTWNLVVVWWEFSSRQKLVFVVDIPVIVCQILFCNSYKTDFYISDLWISSMFYNEHDNNDSFAMATTLIFVVLAQILTSVTSLSEADKITSLPGQPPVKFKQYSGYITVDENRHRALFYYFAEAEAEPAYKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSGNVLERNEYSWNREANMLYVESPAGVGFSYSANESFYEFVNDEITARDNLIFLQRWFSRFPEYKGNEFFITGESYAGHYVPQLAQLIVQTKTKFNLKGIALGNPLLDFNTDLNSRAEFFWSHGLISDTTYNIFNTICNFSQNWRQHHSETPSVSCAEANKLLTREIGNFVNPYDVTLDVCVSSIDQQAQTLNQLQETAKIDVCLDDETSAYLNRKDVQEALHAKLVGIINWSVCSEVLRYDYQNLEVPTIPTLGELVKSGVQVLVYSGDQDSVVPLTGTRSLVNKLAGELGLNTTVPYRAWFAGRQVAGWTQVYGNNNVLSFATIRGAAHEAPFSQPERSLVLFKSLLQGKPLPDAAPSI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1223 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 181 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 218 243 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 192 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 PRINTS Carboxypeptidase C serine protease (S10) family signature 482 495 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 Gene3D - 365 400 - -
Acco06g1223 522 Pfam Serine carboxypeptidase 95 511 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 Gene3D - 411 512 - -
Acco06g1223 522 Gene3D alpha/beta hydrolase 85 344 IPR029058 -
Acco06g1223 522 ProSitePatterns Serine carboxypeptidases, serine active site. 232 239 IPR018202 GO:0004185
Acco06g1223 522 FunFam Carboxypeptidase 84 516 - -
Acco06g1223 522 FunFam Carboxypeptidase 411 512 - -
Acco06g1223 522 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 499 IPR001563 GO:0004185|GO:0006508
Acco06g1223 522 SUPERFAMILY alpha/beta-Hydrolases 91 516 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1223 Acco-ChrAcco06 8443335 8448573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1223 373 515 Calmodulin-binding Proteins AT2G22960 30.070 2.08e-15 72.8