Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1213 ATGCTTGCTCTATCGCCTTCTCTGTTCGCACCCATTGAGTGGACCTTGGAGGAACCCAAAAATCATAATGATCCCAACTTGTTTTACAAAGACGGAGCTACTCCTCAGTTTAGTTGCTCGCCGCCGCCAGGTCATGAGGTTGAGTTTGAGGAAACTCAAAGATCTCCGCCAATATCCCTCGTTGTAGGCGGCGACCCTAGCAAGGTCAAAAAGCTTGACCACAATGCTAGTGAACGCGATCGTCGCAAGAAGATCAATAGCTTGTATTCCTCGCTTCGTTCCATGCTTCCTTTGGCTGATCAAACGAAAAAGTTGAGTATTCCGGCAACAATTTCACGAATTCTAAAGTACATACCGGAGTTGCAGCAGCAAGTGGAAATGCTTATCAAGAAGAAGGAGGAGCTTTTGTTGAGAACCTCTCGGCAAGAAGACGTGTCAGCCAATGAAGAATGTCGAAGGAAAATGGCTCATCACTACGCTGCCTCTGCTTGTGTGGTTTCAACAAGCCGGCTCACTGATAACGAAGCTGTTGTTCAGATTTCCTCTGACAAGCTCCACAAAACTCCTTTTTCAGAGATATTGCTGTGTTTAGAAAAGGAAGGGCTTTTACTGCTAAATGCTTCCACCTTCGACACCTTTGAACATCGGATCTTCCATAACTTGCATTTTCAGATGGATGAAACTTGTGGAATAGAGCCAGAAATTCTAAGTGAGAAGATTTTGTCAATATATGAGAAGAAGGAAGGGAATTTTCGATGTTTCTAA 765 0.4418 MLALSPSLFAPIEWTLEEPKNHNDPNLFYKDGATPQFSCSPPPGHEVEFEETQRSPPISLVVGGDPSKVKKLDHNASERDRRKKINSLYSSLRSMLPLADQTKKLSIPATISRILKYIPELQQQVEMLIKKKEELLLRTSRQEDVSANEECRRKMAHHYAASACVVSTSRLTDNEAVVQISSDKLHKTPFSEILLCLEKEGLLLLNASTFDTFEHRIFHNLHFQMDETCGIEPEILSEKILSIYEKKEGNFRCF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1213 254 SMART finulus 75 127 IPR011598 GO:0046983
Acco06g1213 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 121 IPR011598 GO:0046983
Acco06g1213 254 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 67 241 - -
Acco06g1213 254 Gene3D - 65 156 IPR036638 GO:0046983
Acco06g1213 254 Coils Coil 118 138 - -
Acco06g1213 254 CDD bHLH_AtORG2_like 70 146 - -
Acco06g1213 254 Pfam Helix-loop-helix DNA-binding domain 71 122 IPR011598 GO:0046983
Acco06g1213 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 138 IPR036638 GO:0046983
Acco06g1213 254 FunFam Transcription factor ORG2 65 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1213 Acco-ChrAcco06 8375887 8377772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1213 1 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.923 7.56e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g1213 HLH 2.4e-11 No_clan