Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1212 ATGGTAGCTTTATCGCCTTCTCTATTTGCACCCATTGAGCGGGCCTTGGAGGAACCCACAAGTTTTAATGATCAGATTCAGAACTTGTTTTACAAAGACGGAGCTACTCTTCAGTTTAGTTGCTCACCACCAGATCATCAGGTTCTGGTTCAGGTTGATGAGGCTCAGAGATCTAGGCCAATATCCCTTGCCGCTAGCGGAGAAGACCTTATCATGCTCAAAAAGCTTAACCATAATGCTAGTGAACGTGATCGTCGCAAGAAGATCAATAGCTTGTATTCATCACTTCGTTTTATGCTTCCTATGTCTGATCAAACGAAAAAATTAAGCATTCCGGCAACAATTTCACGAGTCCTAAAGTACATACCGGAGTTACAACAGCAAGTAGAAGGGCTTATCAAGAAAAAAGAAGAGCTTTTGTTGAGAATCTCTCGGCAAGGAGACGCGTCAACCAAAGAATGTCGAAGCAAAATGGCTCATCACTACGCTGCCACTGCTTGTGTGGTTTCAATAAGCAGGCTCAATGATAACGAAGCTGTTGTTCAGATTTCCTCTGACAAGTTCCACAAAACTTCTCTTTCTGAGATATTATTGTGCTTAGAAAAGGAAGGGCTTTTACTGCTAAATTCTGCCACCTTTGACACCTTTGGACATCGGGTCTTCTATAACTTGCATTTGCAGGTGGATGAAACTTGTAGTATAGAGCCAGAAATTCTAAGCAAGAAGATTTTGGCAATTTATGAGAGGAAGGAAGGGAATTTTCAATGTTATTAA 774 0.4134 MVALSPSLFAPIERALEEPTSFNDQIQNLFYKDGATLQFSCSPPDHQVLVQVDEAQRSRPISLAASGEDLIMLKKLNHNASERDRRKKINSLYSSLRFMLPMSDQTKKLSIPATISRVLKYIPELQQQVEGLIKKKEELLLRISRQGDASTKECRSKMAHHYAATACVVSISRLNDNEAVVQISSDKFHKTSLSEILLCLEKEGLLLLNSATFDTFGHRVFYNLHLQVDETCSIEPEILSKKILAIYERKEGNFQCY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1212 257 SMART finulus 79 131 IPR011598 GO:0046983
Acco06g1212 257 FunFam Transcription factor ORG2 69 154 - -
Acco06g1212 257 Gene3D - 72 158 IPR036638 GO:0046983
Acco06g1212 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 143 IPR036638 GO:0046983
Acco06g1212 257 Pfam Helix-loop-helix DNA-binding domain 74 126 IPR011598 GO:0046983
Acco06g1212 257 Coils Coil 122 142 - -
Acco06g1212 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 72 231 - -
Acco06g1212 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Acco06g1212 257 CDD bHLH_AtORG2_like 74 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1212 Acco-ChrAcco06 8372333 8373507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1212 1 254 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 43.182 6.27e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g1212 HLH 2.2e-11 No_clan