Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1156 ATGGATGATTTATTGAAGGATTTCGAACTTGAGCCCAAGAATCCTTCCACCGAAGCCATGCGGAGGTGGAGATCTGCCGTCCGGTTGGTCAAGAACCCTCGCAGGAGGTTTCGTATGGTCGCCGATCTCGACAAACGTTCCGAAGCCGAGAGGATGAAGCAGAAAATCCAGGAAACGATTCGGGTTGCTCTTTATGTTCAAAAGGCGGCACTGCAGTTTATGGATGCTGGAGCTCGAGTTGAGTACAGTCTATCAGAGGAGGCAAGAGAGGCTGGTTTTGGTATTGATCCAGATGACATTGCCTCCATTGTTCGTAACCATGAGTATAAGAAATTGAGAATGATTGGAGGAATTGAAGGGGTTGCATCAAAATTATCTGTCTCCTCCATGGACAAAGGTGTCAGCAAAAACACTATAAACACCAGGCAAAAGATTTATGGGTTCAACCGCTATAAAGAGAAACCAACTAGAACCTTCCTCACGTTTGTGTGGGAAGCATTGCATGACTTGACGCTAATCATTCTTATGGTCTGTGCTTTAGCCTCTATAGGTGTAGGGATTGCCACTGAAGGGTGGCCAAAGGGTGTCTATGATGGTCTGGGAATCATACTTAGTATATTGTTGGTAGTCATTGTTACTGCTGTAAGTGACTACAAGCAATCGCTGCAGTTCAGGGATTTGGATAGGGAGAAGAAAAAGATATTTGTTCAGGTCACCAGGGATGGGAAAAGGGAGAAAATATCAATTTATGATCTGGTTGTGGGAGATATTGTTCATTTGTCAACTGGTGACCTAGTTCCAGCTGATGGGATTTTCAGATGGGGATACAACTTGCTCATCGATGAGTCAAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAACCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGACGATGTTAGTGACAACTGTTGGCATGAGGACTGAATGGGGAAAGCTGATGGAAACCCTAAGCGAGCGTGGAGAGGATGAGACCCCATTGCAAGTGAAATTGAATGGAGTTGCTACGCTAATTGGTAAGATTGGTCTGGCTTTTGCTGTTGTAACATTTCTGGTGTTGATAGTAAGGTTTGTGGTGGAAAAGGCACAGCGCGGTGAGATCACTAATTGGTCTTTAATTGATGCAATGAAGTTGCTGGACTACTTTGCTATTGCTGTTACCATTATAGTTGTTGCAGTTCCTGAAGGATTACCATTGGCTGTAACACTCAGCCTTGCTTTTGCTATGAAAAAATTAATGGATGACAGGGCACTTGTGAGGCATCTTGCAGCCTGTGAGACAATGGGTTCATCCAGTTGCATTTGCACAGATAAGACAGGGACACTGACTACTAATCACATGGTGGTTGATAAAATATGGACATGCGAAAAATCCGTGGATATGAAAGGTGAAGAGAGCAGAGACAAATTGAAAACGGAAGTATCTAAAGAAGTTTTTAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGCAGTTAAAGATAAGGATGGAAAGATCACAATATTGGGAACACCAACAGAATCTGCTTTAATGGAATTTGGGTTGTTTTTGGGTGGTGATTTTGATGCTCAGCGCAGTGAGTATCAGATTGTTAAGATTGAGCCTTTCAACTCAGTCCGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATGGAGGGGTACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATTATTGATAGTGATGGAAATACTGTTGATCTTCCTGAAGGTCGTGCAAAGAATGTCTCTGATGTGATAAATGGTTTTGCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTTTCAAAGACATAAATGATGCCCAACAAGGGGAGACTAGTATCCCTGATAATGGCTATACACTAATAGCTGTTGTAGGAATCAAGGATCCTGTGCGCCCTGGGGTTAAAGAAGCTGTTCAAACTTGTTTGGCCGCGGGAATAACAGTTCGTATGGTCACTGGAGACAATATAAACACAGCTGCGGCTATAGCTAAAGAATGTGGTATACTTACTGAAGGTGGTGTTGCCATTGACGGATCAGAATTTCGAAACCTGTCTCCTGATCAAATGAAGAAGATCATACCAAAAATTCAGGTCATGGCACGTTCCTTACCGCTTGACAAACATGCCTTTGTTACAAATTTGCGAAACATGTTTGGTGAGGTTGTTGCTGTTACAGGAGATGGAACCAATGATGCTCCGGCGCTGCATGAGTCTGACATTGGACTTTCCATGGGAATAGCTGGGACCGAGGTTGCTAAAGAAAATGCTGATATCATTATAATGGATGATAACTTCTCAACTATTGTCAATGCGGTCAGATGGGGGCGAGCTGTATACATAAATATTCAGAAATTTGTGCAATTTCAGTTAACAGTCAATGTGGTGGCACTGGTGATCAACTTCGTTTCTGCATGCCTCACAGGATCTGCTCCTTTAACAGCTGTACAATTGCTTTGGGTAAACTTGATTATGGACACTCTGGGTGCTTTGGCCCTGGCCACAGAACCTCCTACGGATGAGCTCATGAAAAGGCCTCCTGTTGGTAGGGTAGCAAGCTTTATCACCAAACCCATGTGGAGAAATATCATTGGTCAAAGTATATATCAACTCGTTGTCCTAGCAGTTCTCAATTTTGATGGGAAGAACATTCTGAAACTCAATGGTCCGGATGCAACCAGTGTCCTAAACACGTTGATATTCAACTCCTTTGTGTTCTGCCAGGTTTTCAATGAGATCAACAGCCGAGCCATAGAGGACATAAACATATTCAGAGGCATGTTCGAGAGTTGGATATTTTTAGCTGTAGTGTTTTCCTCGGTGGCATTTCAAGCGGTGATTGTTGAGTTCTTGGGAGCATTTGCCAGCACTGTGCCTTTAAACTGGCAACTATGGGTGCTGAGTGTGCTAATTGGAGCAGTTAGCTTGCCCGTAGGGGCCATCCTCAAGTGCATCCCTGTAGAAAGAGCTGCTCCAAAACACCACCACCATGGCTATGTCGCTTTGCCTTCTGGTCCTGACATGGCGTAA 3108 0.4337 MDDLLKDFELEPKNPSTEAMRRWRSAVRLVKNPRRRFRMVADLDKRSEAERMKQKIQETIRVALYVQKAALQFMDAGARVEYSLSEEAREAGFGIDPDDIASIVRNHEYKKLRMIGGIEGVASKLSVSSMDKGVSKNTINTRQKIYGFNRYKEKPTRTFLTFVWEALHDLTLIILMVCALASIGVGIATEGWPKGVYDGLGIILSILLVVIVTAVSDYKQSLQFRDLDREKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDLVPADGIFRWGYNLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGTMLVTTVGMRTEWGKLMETLSERGEDETPLQVKLNGVATLIGKIGLAFAVVTFLVLIVRFVVEKAQRGEITNWSLIDAMKLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDDRALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKIWTCEKSVDMKGEESRDKLKTEVSKEVFSILFQAIFQNTSAEAVKDKDGKITILGTPTESALMEFGLFLGGDFDAQRSEYQIVKIEPFNSVRKKMSVLVRLPDGGVRAFCKGASEIILRMCDKIIDSDGNTVDLPEGRAKNVSDVINGFASEALRTLCLAFKDINDAQQGETSIPDNGYTLIAVVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAAAIAKECGILTEGGVAIDGSEFRNLSPDQMKKIIPKIQVMARSLPLDKHAFVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLSMGIAGTEVAKENADIIIMDDNFSTIVNAVRWGRAVYINIQKFVQFQLTVNVVALVINFVSACLTGSAPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRPPVGRVASFITKPMWRNIIGQSIYQLVVLAVLNFDGKNILKLNGPDATSVLNTLIFNSFVFCQVFNEINSRAIEDINIFRGMFESWIFLAVVFSSVAFQAVIVEFLGAFASTVPLNWQLWVLSVLIGAVSLPVGAILKCIPVERAAPKHHHHGYVALPSGPDMA 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1156 1035 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 PANTHER CATION TRANSPORTING ATPASE 79 1013 - -
Acco06g1156 1035 Pfam E1-E2 ATPase 235 428 - -
Acco06g1156 1035 Pfam Cation transport ATPase (P-type) 509 590 - -
Acco06g1156 1035 FunFam Calcium-transporting ATPase 769 1015 - -
Acco06g1156 1035 FunFam Calcium-transporting ATPase 15 75 - -
Acco06g1156 1035 SMART Cation_ATPase_N_a_2 114 187 IPR004014 -
Acco06g1156 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 108 1014 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Acco06g1156 1035 FunFam Calcium-transporting ATPase 460 656 - -
Acco06g1156 1035 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Acco06g1156 1035 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Acco06g1156 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Acco06g1156 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Acco06g1156 1035 Gene3D - 132 333 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Acco06g1156 1035 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Acco06g1156 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1013 IPR023298 -
Acco06g1156 1035 FunFam Calcium-transporting ATPase 649 797 - -
Acco06g1156 1035 SFLD Haloacid Dehalogenase 432 804 - -
Acco06g1156 1035 SFLD p-type atpase 432 804 IPR044492 -
Acco06g1156 1035 NCBIfam HAD-IC family P-type ATPase 386 474 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 NCBIfam HAD-IC family P-type ATPase 717 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 NCBIfam HAD-IC family P-type ATPase 547 697 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g1156 1035 Gene3D - 165 1011 - -
Acco06g1156 1035 Gene3D - 447 797 IPR023214 -
Acco06g1156 1035 CDD P-type_ATPase_Ca_PMCA-like 139 885 - -
Acco06g1156 1035 Gene3D - 460 656 IPR023299 GO:0000166
Acco06g1156 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 661 IPR023299 GO:0000166
Acco06g1156 1035 FunFam Calcium-transporting ATPase 213 333 - -
Acco06g1156 1035 Gene3D - 15 76 - -
Acco06g1156 1035 SUPERFAMILY HAD-like 449 857 IPR036412 -
Acco06g1156 1035 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1156 Acco-ChrAcco06 7936412 7944758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1156 56 1032 Primary Pumps ATPases AT3G57330 73.490 0.0 1488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1099 02 7940112 7948994 Acco06g1156 06 7936412 7944758 CCT
Acco06g1156 06 7936412 7944758 Acco06g1156 06 7936412 7944758 ECH