Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1149 ATGGTGAAGAGAGATGAAATAATAATAATGGAGGAGGAAAGTAGTATTCGTGCTCGTGCATGGGGAGGAGAAGGAGTGGTGTGGGAAGACTTGACGGTGGAGGCTACTCGTCATCAGAAGAAGAAGAAGCTGCTGAATAACGCCACTGGTTCCGCCCTCCCCGGCAGGCTCTTGGCCCTCATCGGTCCTTCCGGCTCCGGCAAAACCACCCTCCTCCGCTCTCTCTCTGGAAGGCTTGCTGGGAACGTTGTAGTGACTGGCAACGTTGTAATCGGCGGGAAGAAGGGATGCTTCAAATGCAGAGAAGTGTCTTATGTGGATACAGAAGAACTGTTCTTGGGGACTTTGACGGTAAGAGAAACCCTAGCATACTCTGCAAATCTGAGGCTTCCTTCGAGAATGACCCGAGAGGAGATAAGTAAGGTGGTGGAAGAAACCATAATCCAACTGGGTCTAGAAGAATGTGCAGACAGCAGGCTAGGGAACTGGCATTTACGAGGGATTAGCAGTGGCGAAAAGAAGAGACTTGGTATTGGCATTGAGATTTTGACACAGCCTCATGTCTTGCTTCTGGACGAACCCACAAGTGGACTTGACAGTGCCTCTGCTTTCTACGTGATTCAAACCCTGTGCAGCATAGCTAATGATGGAAAGGTAGTTGTCTGTTCCATTCACCAGCCGTGCAATGAGATCTTTAGCCTTTTTGATGATCTTCTCTTGCTATCGAGTGGTGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTTTGAAGTTCTTTGCTGATGCAGGGTTCCCCTGTCCAACTAGAAGAAATCCTTCAGATCATTTCCTTCTCTGTGTTAATTTGGACTTTGACGCCATTAATACTGCTCCGATGAGATCTGAAGCAAGTATTCTGACGTCATCATATCCTGCAACAGGCAAGAAAACAGAAGACATTAGAGCGACACTCATTGAGTGTTACAACAATTCAGAGCAAATGATCAATGCAAGAAGGAGAATTCAATGTTTGAAATCCAATGGAGACCAAGTAATCAAGTCCAATGTAAGTGGCAGCTCCAGTTCTTGGAAGCAGCTCTACACATTGACCCATCGATCATTCCTAAATATGTCAAGGGACATAGGCTACTACTGGCTGAGGATCTTTTTCTATTCCCTGGCAGCCGCTGGTATTGGTCTCTTCTTTTTTCATCTTGGTACTGACAAGGACTCAATCTTGGCCAGAGGAAAGTGTGTATCATTCATTTATGGGTTCATAATTTGTCTGTCATTTGGAGGATTGCCACTTTTCATTGAAGAATTGAAGGTGTTCTACGGTGAAAGGTCCAAAGGGCATTATGGAGAAGCTGTATTTGTACTGTCAAACATCCTATCATCTTTCCCTTTCCTATTTGTTACGGCGTTGTGTGTCGTAGCAATCACATACTCCATGGTGGAACTTCATCTGGGTTTAGCTCAATGTGTTTTTTTCTTCCTCAACTTATTGGTCTGCCTATCTGTCATTGAGGGCTGCCTCATGGTAGTAGCATCACTGGTGCCTAATGTCCTGATGGGCATAGGAGCAGCAACGGGAGTGATTCTTTTCATGATGATGTGTTCTCCAATCTTCAGACCACAACCTGACCTTCCTAAGTTCTTTTGGCGCTACCCCATGTCCTACTTGAGCTTTGCTACTTGGGCAGTGCAGGGGCAACTCAAGAATGACATGCTGGGGCTTGAACTTCATCCTGTGATTCCTGGTAACCCCAAAATTAAGGGAGAACAAGTACTGAAACTGATATTTGGGGTGTCATTAAATCATAACAAGTGGTGGGACATAACTGCATTGGTTACCCTCTTTATAGCTCACCGATTTATCCTTTTCTTGGTGCTTCGGTATAACAAAAGACAGATATCACCCTTGCGGTGGTTTTATGCCAAGGTCAGACCACACTATGGTGAAGGATTTTCACTGAGCAAGAAGCAGCCTCGTATTGCTTTCAAGAAACAGCAAGCTGTTCCATTATCTGCTGAATAG 2016 0.4509 MVKRDEIIIMEEESSIRARAWGGEGVVWEDLTVEATRHQKKKKLLNNATGSALPGRLLALIGPSGSGKTTLLRSLSGRLAGNVVVTGNVVIGGKKGCFKCREVSYVDTEELFLGTLTVRETLAYSANLRLPSRMTREEISKVVEETIIQLGLEECADSRLGNWHLRGISSGEKKRLGIGIEILTQPHVLLLDEPTSGLDSASAFYVIQTLCSIANDGKVVVCSIHQPCNEIFSLFDDLLLLSSGETVYFGEAKMALKFFADAGFPCPTRRNPSDHFLLCVNLDFDAINTAPMRSEASILTSSYPATGKKTEDIRATLIECYNNSEQMINARRRIQCLKSNGDQVIKSNVSGSSSSWKQLYTLTHRSFLNMSRDIGYYWLRIFFYSLAAAGIGLFFFHLGTDKDSILARGKCVSFIYGFIICLSFGGLPLFIEELKVFYGERSKGHYGEAVFVLSNILSSFPFLFVTALCVVAITYSMVELHLGLAQCVFFFLNLLVCLSVIEGCLMVVASLVPNVLMGIGAATGVILFMMMCSPIFRPQPDLPKFFWRYPMSYLSFATWAVQGQLKNDMLGLELHPVIPGNPKIKGEQVLKLIFGVSLNHNKWWDITALVTLFIAHRFILFLVLRYNKRQISPLRWFYAKVRPHYGEGFSLSKKQPRIAFKKQQAVPLSAE 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1149 671 SMART AAA_5 54 253 IPR003593 GO:0016887
Acco06g1149 671 Pfam ABC-2 type transporter 358 567 IPR013525 GO:0016020|GO:0140359
Acco06g1149 671 Pfam ABC transporter 45 196 IPR003439 GO:0005524
Acco06g1149 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 258 IPR027417 -
Acco06g1149 671 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524|GO:0016887
Acco06g1149 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 25 640 - -
Acco06g1149 671 Gene3D - 22 262 IPR027417 -
Acco06g1149 671 Pfam ABC-2 type transporter 225 277 IPR043926 GO:0140359
Acco06g1149 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 268 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1149 Acco-ChrAcco06 7863067 7866430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1149 52 237 Calmodulin-binding Proteins AT2G36910 27.273 1.30e-07 53.1