Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1145 ATGATGGAGGAAGGGAAGAATAATAAAGAGTTGTTGTTGGATCCTCATCAGTTTCATGAAAGGAAGTGGAATCCGCCACCTTTCTTGTTAAAGACATACATGCTGGTGGAGGATCCGGCCACCGACAACATCATATCATGGAACCCCGACGGCACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCCCGTGACCTTCTTCCCACTCTCTTCAAGCACAGCAACTTCTCCAGCTTTGTTCGCCAGCTCAATACCTACGGATTTCGTAAAGCGGCAACGAACAGATGGGAATTTTGCAACGACAAATTCAGGAAAGGGGAGAGAGAAAAACTAAGTGAGATCAGACGAAGAAAGGCGTGGTCCAACAGGCAACAGCAACAAGCAAATCATAATCAGGAATATTCTGATCAGGAAGAGCAAAGGTCATCTTCAACCTCTTCGTCTTCGGGATTTTCTAATCTGGTAGATGAGAACAAGAGACTCAAGAGAGAGAACGGGGAACTGAACTCAGAGCTGGCGGCCATGAAGAGCAAGTGCAGGGACCTGCTTGAGTTGGCGGCTAAGCATGCCAAGAAAAACGACGAAGAAGAAGACGAGAAGGCGCCTAAGTTATTCGGGGTGAGGCTTCATGTGAAACGAGGACAAAGAGATTTAAAGACAAATCCAAGTCCCAGTATTTTCTTGCCCCAGTCATGCAAATAA 702 0.4744 MMEEGKNNKELLLDPHQFHERKWNPPPFLLKTYMLVEDPATDNIISWNPDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKAATNRWEFCNDKFRKGEREKLSEIRRRKAWSNRQQQQANHNQEYSDQEEQRSSSTSSSSGFSNLVDENKRLKRENGELNSELAAMKSKCRDLLELAAKHAKKNDEEEDEKAPKLFGVRLHVKRGQRDLKTNPSPSIFLPQSCK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1145 233 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco06g1145 233 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco06g1145 233 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco06g1145 233 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco06g1145 233 Gene3D - 19 119 IPR036388 -
Acco06g1145 233 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 24 191 IPR027725 -
Acco06g1145 233 MobiDBLite consensus disorder prediction 116 158 - -
Acco06g1145 233 MobiDBLite consensus disorder prediction 121 155 - -
Acco06g1145 233 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco06g1145 233 SUPERFAMILY "Winged helix" DNA-binding domain 24 117 IPR036390 -
Acco06g1145 233 FunFam Heat stress transcription factor B-4 20 118 - -
Acco06g1145 233 Coils Coil 151 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1145 Acco-ChrAcco06 7842945 7843913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1145 25 209 HSF AT2G41690 54.854 1.22e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco06g1145 HSF_DNA-bind 2e-31 CL0123