Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1144 ATGGCTTCTTCTTCCTCTGATCCTCCTCCAAAGTCCGAGCTTGGCTCAGCCGTGGTAGCCACTTCGGAAGCAGCCACCACCGCCGATCAGGTGTTTCTTTACAGGGATTTCAAGAAGCCAAAGAAAGAGAGGGGATGTACGGCCAAAGAGCGAATAAGCAAAATGCCTCCTTGTACTGCCGGTAAACGCAGCTCCATATATCGTGGTGTAACCAGGCATAGATGGACAGGTCGTTATGAGGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCCCTAAAATATTGGGGTCCTGGGACTCTCATTAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTATTCCAGAGAAGAATACCTAGCATCTTTACGACGGAAGAGCAGTGGATTTTCAAGAGGAATCTCAAAATATCGTGGACTTTCTAGTCGATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACCTCAATAGCATACATTATGGTGCTGGTGATGATTCAGCTGCAGAAAGTGAATATTTAAGTGGTTTCAGTGTAGACAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGATCTAATAAGAGTCGCCAAGCTGATGCTGGAACAAAATCATCAGAAGAAAAAAAGTGCAGCTTTGCTGGAGATCATTCCAGTGAACTCAGAACATTGGAACAGCAAGCACAACCTACTGAACCATATCAGATGCCACGGTTAGGCGCATCCCATGATGAAAAAAAGCACAAGAATACTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCCTACGAGAGCTTGCTAGAGAAAGCAACAAAGAGAGAGGAAAATAGCACTGAACCTAATGAAAATGAAAACAAAAATAGCATTGACAAGTTGGACCGTGGCAAGGCGGTCATGAAATCATCAAATCATGATGGCAGCCACGAAAAACCTGAATCTGTAATGGGGATGAGTGGGGCTTTGTCTCTTCAAAAGAATGTTTACAACCCACTGGTTCCATTCTTGTCTGCACCTCTATTGACTGCTTATAATACTATTGATCCCTTGGTAGATCCTCTTCTCTGGACGTCTCTTGTTCCTATGCTTCCTGCCGGGTTTCCCCGTAATGCTGAGGTTACAAAGACCGAGGCCAGTTCATCTTATACCGTCTTTCAGCCGGAGGAGTGA 1266 0.4431 MASSSSDPPPKSELGSAVVATSEAATTADQVFLYRDFKKPKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNYSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYLNSIHYGAGDDSAAESEYLSGFSVDRKIDLTSYIKWWGSNKSRQADAGTKSSEEKKCSFAGDHSSELRTLEQQAQPTEPYQMPRLGASHDEKKHKNTSVSALSILSRSAAYESLLEKATKREENSTEPNENENKNSIDKLDRGKAVMKSSNHDGSHEKPESVMGMSGALSLQKNVYNPLVPFLSAPLLTAYNTIDPLVDPLLWTSLVPMLPAGFPRNAEVTKTEASSSYTVFQPEE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1144 421 MobiDBLite consensus disorder prediction 232 247 - -
Acco06g1144 421 SUPERFAMILY DNA-binding domain 65 131 IPR016177 GO:0003677
Acco06g1144 421 MobiDBLite consensus disorder prediction 250 264 - -
Acco06g1144 421 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 30 309 - -
Acco06g1144 421 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Acco06g1144 421 Gene3D AP2/ERF domain 66 131 IPR036955 GO:0003700|GO:0006355
Acco06g1144 421 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g1144 421 MobiDBLite consensus disorder prediction 301 347 - -
Acco06g1144 421 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Acco06g1144 421 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Acco06g1144 421 MobiDBLite consensus disorder prediction 301 344 - -
Acco06g1144 421 Pfam AP2 domain 66 121 IPR001471 GO:0003700|GO:0006355
Acco06g1144 421 MobiDBLite consensus disorder prediction 228 284 - -
Acco06g1144 421 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Acco06g1144 421 FunFam AP2-like ethylene-responsive transcription factor 65 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1144 Acco-ChrAcco06 7834060 7837530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1144 1 405 AP2-EREBP Transcription Factor Family AT2G41710 60.621 9.11e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g1144 AP2 2.1e-09 CL0081