Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1140 ATGATATTTGGTTCAGAGGATGAGGTGAGATCGTATTATTCAAAATATGCCAACCAAGTAGGTTTTGGCGTCATGACAAGAACCTCAAGGAAGGTAGCTGATGGCAAGATTGGATATTTTATACTTGCATGTTCTAGAGAGGGATTCAGAAGAAATGGTAGAAGAAATCCCATCAGAAGTGTTCCATCGAGGAAACAGAAGTGTGAAGCCAGGATCAACGTTTCTTTATGTAAAGATGGATTTTACCGGATTCAAACAGTTACGCTTAATCACAATCATGAACTGAGCCCAGGTCAGGTCAAGCTTAATGTTGATATTGACACGCGAGCTAAAAGGAAACTAGACCCAGAAGATCAAACTGACAAGCAGATGAACAAGAGTTTCCGGTCTTTAGTGGTTGGAAATGGGGTTAATGACAATGTGATGTTGTGTCCAAATGATTGTGGAAATTACATTCGGTCTGGAGGCCGGTTGGTTGGTGTGGATGGAGATGGTAATGCTCTTTATAAATATTTCATGCGCATGCAAGAACAGGATTGCAATTTCTTCTATGTCATAGATTTGGATGATTATTTATGTGTGAGGAATGTTTTCTGGGCTGATGCTAGAAGTAGAGCTGCATACAAGTCATTTGGTGATGTGGTTACATTGGATACAACATATGTCTCTGATCAATACAAATTACCTCTCGTATCTTTTGTTGGAGTGAACCATCATGGCCAATCTATACTTTTTGGTTGTGGGTTGATGTCATGCAGGGACACAAAGTCGTTTGTTTGGTTGTTACAATCATGGTTACATTGTATGTATGGTGTTTCACCAAAAGGCATCATAACAGATGAATGCAAGGCCTTGCTAAATGCAATTAAAATTGTATTCCCCTTTGCTCGTCATCGGTGGTGTTTATGGCATATAATGAAAAAATTTCCTGAAAAGTTAGGTCAACATGCGGACTACAAGCTTTTAAGTTGTCGTTTAAAAGCTGCTATATACGAAGCACTTGCTCCCAATGAATTCGAGATGAATTGGAAAACAACCATGAAGGAATTTGGGCTAGAGGACAATGAATGGCTGAATGAGTTGTGCCTTGAGCGACATCGATGGGTGCCTATCTTTGTAAAGAGTGAGTTTTGGGCCGGAATGTCTACTATTCGATACGGTGAAATCATGCATCCTTTTTTTGATGGATTTGTTGGTTCCCTGACTACGATGAAACAATTTCTTGATGTATATGATAATGCATTGCAAGCCAGGGCAGAGAAAGAGTTTGAAGCTGATTTCCGTTCATTTTGCATTACTCTTTCTTGTGCTACCAAGTCTCCGTTTGAGCGGCAGTTTCAGACTGCTTACACTCACGCAAAGTTTCTGGAGGTTCAGCGAGAGTTTGTTGGAAAGGCTGATTGTAACATGGTTGTTGTTCATGATGAAGGTTCTGTTTGCCGTTATAATGTTATTGAAGATGTGATGGTTGAAGGCAAACCTAAAGACGTTTCATATGGAGTTATATTTGACAGGGTAAACTGTGATTTGAAGTGCTCTTGCCACATGTTTGAGTTCAAAGGAATAATTTGTAGGCACTCACTGGCTGTACTGTCCCAAGAGCGAGTTAAAGAGATTCCATGTAAGTATGTTTTGGATAGATGGAGAACGAATCTAAAGAGGAGACATGAATATGTGAGGACTAGTTACACTGTCAGACAACTCAAACCTCGAATGGAAAGATTTGATTTATTATGCAAGCAATTTGACTCTGTTGCTGAAATTGCTGCTGAATTTGAGGAAACAAGTGCTTTTGTGAGTAATACCCTTTGTGACTTGAAGGAGAAGCTGGAAGCATGGGCAAGCCATATGAGAAACTCATCTGAGGCGGCAGTACCAATAAGCTGTGCAATTAACGGTGCTCCTTGA 1908 0.4009 MIFGSEDEVRSYYSKYANQVGFGVMTRTSRKVADGKIGYFILACSREGFRRNGRRNPIRSVPSRKQKCEARINVSLCKDGFYRIQTVTLNHNHELSPGQVKLNVDIDTRAKRKLDPEDQTDKQMNKSFRSLVVGNGVNDNVMLCPNDCGNYIRSGGRLVGVDGDGNALYKYFMRMQEQDCNFFYVIDLDDYLCVRNVFWADARSRAAYKSFGDVVTLDTTYVSDQYKLPLVSFVGVNHHGQSILFGCGLMSCRDTKSFVWLLQSWLHCMYGVSPKGIITDECKALLNAIKIVFPFARHRWCLWHIMKKFPEKLGQHADYKLLSCRLKAAIYEALAPNEFEMNWKTTMKEFGLEDNEWLNELCLERHRWVPIFVKSEFWAGMSTIRYGEIMHPFFDGFVGSLTTMKQFLDVYDNALQARAEKEFEADFRSFCITLSCATKSPFERQFQTAYTHAKFLEVQREFVGKADCNMVVVHDEGSVCRYNVIEDVMVEGKPKDVSYGVIFDRVNCDLKCSCHMFEFKGIICRHSLAVLSQERVKEIPCKYVLDRWRTNLKRRHEYVRTSYTVRQLKPRMERFDLLCKQFDSVAEIAAEFEETSAFVSNTLCDLKEKLEAWASHMRNSSEAAVPISCAINGAP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1140 635 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Acco06g1140 635 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 612 IPR031052 GO:0006355
Acco06g1140 635 Pfam MULE transposase domain 214 308 IPR018289 -
Acco06g1140 635 ProSiteProfiles Zinc finger SWIM-type profile. 499 535 IPR007527 GO:0008270
Acco06g1140 635 SMART 26again6 510 537 IPR006564 GO:0008270
Acco06g1140 635 Pfam SWIM zinc finger 509 532 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1140 Acco-ChrAcco06 7805341 7807248 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco06g1140 MULE 3.9e-32 CL0219