Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1136 ATGAGTGTTCTGCGGTTGCAAAGAAGCTCGGAATCTTCATTGAAGGAGGGGGAACATTGTAAGGTGATGGAAATTCTGGGCTTGTTGTGTTTTGTGGTTGCTTGGTATGTGTCAAAATCTGGTCTTGAAGTTGAGGGTGCTGAGCTACAGGATCAAACTATATTGCTTGCCCTTAACCTAGAGCTTAAAGTACCAAGATGGGACGCCAACAACTCAAGTTACTGCTCGTGGCAAGGCGTTAGCTGCAATGACCGCTCAATGGTAGTGAAGCTCGATCTGTCTCATGCAAACCTCCGAGGTAATGTCACTCTGGTGTCCCAGCTCAAAGCTCTTAGGCAGCTTGACCTTTCAAATAACAATTTTCATGGTTACATTCCTCCGGCTTTTGGCAATTTATCTGATCTTGAAGTTCTCGATTTGTCTTCAAATAAGTTCGAAGGTTCAATTCCACCAGAATTGGGCGGCCTTAGGAATCTTATATCGTTAAACCTTTCGAACAACTTGCTTGTGGGGAAAATTCCAAGTGAACTTCATGGCCTAGAGAAATTGCAGGAGTTTCAAGTCTCTAGTAATCAACTGAATGGATCTCTACCTACTTGGGTGGGAAACTTAACCAATCTGAGAGTTTTGGCTGCCTATGAGAATCTTCTAGGTGGCATGATTCCGGATAATCTTGGCTTGGCTTCTGAGCTTGAAATTCTTAATGTGCATTCAAACCAGCTTGAAGGCCCTATTCCAGCTAGCATTTTTACCTCAGGGAACCTTGAAGTTCTGGTTCTGACCCAGAACAATTTGAGTGGTGATCTTCCTCAAGAACTCGGGAATTGCCAAGGTCTTTCCAATGTCCGAATTGGGAACAACCATCTAGTTGGTACTATTCCTAAGACCATAGGAAACATTAGTAGTCTTACCTACTTTGAAGCAGACAATAACAATCTTTCTGGTGAGGTAGTGTCTCAGTTTTCTCAGTGTTCTAATCTCACGCTTCTGAACCTAGCTTCGAATGGATTCAGTGGAATAATTCCACCAGAACTTGGGCAGCTCATGAACCTGCAGGAATTAATTCTTTCTGGAAATAGCCTGTTTGGAAATATTCCTGAAGCAATTTTGAGGTGCAGAAATCTTAACAAGCTTGATATAAGCAATAACAGGTTCAATGGAACACTACCAAATGACATCTGCAAATTGTCTAGGCTGCAGTTCTTGTTATTGGGTCAGAATTCCATAGGAGGGGAGATCCCTCATGAAATTGGAAATTGTGCAAAACTTCTAGAGTTGCAATTGGGCAGTAACTATTTGACAGGAATTATCCCTTCTGAGATTGGTCACATCAGGAACTTGCAGATTGCTTTAAATTTGAGTTTCAATCATCTTCATGGATCACTGCCTCCTGAGTTAGGAAGACTGGACAAACTTGTCGCTCTGGATGTTTCGAACAACAGGCTCTCAGGCAATATCCCAGCCGAGCTGAAGGGTATGTTGAGCTTGATAGAGGTAAACTTTTCAAATAATTTGCTCAGCGGTCCAGTACCAACATTTGTGCCATTCCAAAAGAGCCCCAATTCAAGTTTTATGGGTAATAAAGAGCTCTGTGGAGAGCCATTAATTTCTTCATGTGGAGATTACGATGACAGCAATACCTACCATCACAGAGTTTCTTACAGAATCATACTTGCAGTAATTGGTTCTGGTTTGGCAGTTTTTATGTCAGTTACTGTGGTGGTCTTGCTGTTTATGATTAGAGAGAGGCAAGAAAAAGCAGCCAAAGATGCTGGGGTGGTTGATGACGAAACTAATACCAAACCAACCATAATAGCAGGGAGTGTCTTTGTTGAAAATCTAAAACAAGCAGTAGACCTTGATGCTGTTGTTAAGGCAACCCTCAAAGATTCTAATAAGCTCAGCAGTGGTACTTTTAGTACAGTTTACAAGGCGGTCATGCCTTCTGGGATGGTTTTATCTGTTAGGAGACTCAAGTCCATGGATAAGACCATAATCCACCACCAAAACAAGATGATCAGGGAACTTGAGAGGCTGAGCAAACTCTGTCATGACAATCTGGTTCGACCCATAGGATATGTTATTTATGAAGATGTTGCTCTTCTCTTGCATCATTTCTTACCCAATGGAACATTGGCTCAGTTTCTTCATGAATCTAGCAAGCAACCTGAATATCAACCCGACTGGCCTACTAGATTATCCATTGCCATCGGTGTGGCAGAAGGTTTGGCTTTCCTGCATCATGTGGCAATTATACACCTTGACATTTCTTCTGGCAATGTTCTTTTGGATGCAAATTTCAAGCCTTTGCTTGGGGAGATTGAGATATCAAAACTTCTCGATCCAACCAGAGGTACTGCAAGTATTAGTGCTGTTGCTGGTTCCTTTGGATACATACCACCAGAATATGCATATACCATGCAAGTTACCGCACCCGGCAATGTCTACAGTTATGGTGTAGTTCTACTTGAAATCCTGACAACACGACCACCGGTTGATGAGGATTTCGAAGAAGGCATGGATTTGGTGAAGTGGGTTCATAGTGCTCCAGTAAGAGGGGAAACTCCAGAGCAGATACTCGATGCAAGGCTTAGCACAATATCATTTGGTTGGAGGAAAGAAATGCTTGCCGCTTTGAAGGTTGCATTGCTCTGCACTGATACTACACCTGCAAAACGACCCAAGATGAAGAAGGTAGTGGAAATGCTCCAAGAAATAAGGCAAAACTGA 2730 0.4249 MSVLRLQRSSESSLKEGEHCKVMEILGLLCFVVAWYVSKSGLEVEGAELQDQTILLALNLELKVPRWDANNSSYCSWQGVSCNDRSMVVKLDLSHANLRGNVTLVSQLKALRQLDLSNNNFHGYIPPAFGNLSDLEVLDLSSNKFEGSIPPELGGLRNLISLNLSNNLLVGKIPSELHGLEKLQEFQVSSNQLNGSLPTWVGNLTNLRVLAAYENLLGGMIPDNLGLASELEILNVHSNQLEGPIPASIFTSGNLEVLVLTQNNLSGDLPQELGNCQGLSNVRIGNNHLVGTIPKTIGNISSLTYFEADNNNLSGEVVSQFSQCSNLTLLNLASNGFSGIIPPELGQLMNLQELILSGNSLFGNIPEAILRCRNLNKLDISNNRFNGTLPNDICKLSRLQFLLLGQNSIGGEIPHEIGNCAKLLELQLGSNYLTGIIPSEIGHIRNLQIALNLSFNHLHGSLPPELGRLDKLVALDVSNNRLSGNIPAELKGMLSLIEVNFSNNLLSGPVPTFVPFQKSPNSSFMGNKELCGEPLISSCGDYDDSNTYHHRVSYRIILAVIGSGLAVFMSVTVVVLLFMIRERQEKAAKDAGVVDDETNTKPTIIAGSVFVENLKQAVDLDAVVKATLKDSNKLSSGTFSTVYKAVMPSGMVLSVRRLKSMDKTIIHHQNKMIRELERLSKLCHDNLVRPIGYVIYEDVALLLHHFLPNGTLAQFLHESSKQPEYQPDWPTRLSIAIGVAEGLAFLHHVAIIHLDISSGNVLLDANFKPLLGEIEISKLLDPTRGTASISAVAGSFGYIPPEYAYTMQVTAPGNVYSYGVVLLEILTTRPPVDEDFEEGMDLVKWVHSAPVRGETPEQILDARLSTISFGWRKEMLAALKVALLCTDTTPAKRPKMKKVVEMLQEIRQN 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1136 909 Gene3D Ribonuclease Inhibitor 282 542 IPR032675 -
Acco06g1136 909 Gene3D Transferase(Phosphotransferase) domain 1 707 909 - -
Acco06g1136 909 Pfam Leucine rich repeat N-terminal domain 65 83 IPR013210 -
Acco06g1136 909 Pfam Protein tyrosine and serine/threonine kinase 631 903 IPR001245 GO:0004672|GO:0006468
Acco06g1136 909 CDD STKc_IRAK 634 906 - -
Acco06g1136 909 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 707 909 - -
Acco06g1136 909 Gene3D Phosphorylase Kinase; domain 1 593 706 - -
Acco06g1136 909 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 39 905 - -
Acco06g1136 909 Gene3D Ribonuclease Inhibitor 49 200 IPR032675 -
Acco06g1136 909 SUPERFAMILY L domain-like 65 319 - -
Acco06g1136 909 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 49 196 - -
Acco06g1136 909 SMART LRR_typ_2 156 179 IPR003591 -
Acco06g1136 909 SMART LRR_typ_2 180 204 IPR003591 -
Acco06g1136 909 SMART LRR_typ_2 396 420 IPR003591 -
Acco06g1136 909 SMART LRR_typ_2 108 131 IPR003591 -
Acco06g1136 909 SMART LRR_typ_2 348 372 IPR003591 -
Acco06g1136 909 SMART LRR_typ_2 132 155 IPR003591 -
Acco06g1136 909 ProSiteProfiles Protein kinase domain profile. 628 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1136 909 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 598 706 - -
Acco06g1136 909 Pfam Leucine rich repeat 110 169 IPR001611 GO:0005515
Acco06g1136 909 Gene3D Ribonuclease Inhibitor 209 281 IPR032675 -
Acco06g1136 909 ProSitePatterns Tyrosine protein kinases specific active-site signature. 751 763 IPR008266 GO:0004672|GO:0006468
Acco06g1136 909 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 248 543 - -
Acco06g1136 909 SUPERFAMILY L domain-like 215 542 - -
Acco06g1136 909 SUPERFAMILY Protein kinase-like (PK-like) 628 906 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1136 Acco-ChrAcco06 7785486 7788573 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1136 31 908 Receptor kinase-like Gene Family AT2G41820 72.789 0.0 1291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g1136 PK_Tyr_Ser-Thr 1.9e-27 CL0016