Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1113 ATGGGGTGTCGTCAGATACCGACGATCAGCAGGATAAGAGTTGATTCAAAACAGGGAGTGCCGACCCCTATACGTTTTTCTACTTTTATCGCTCTGAGGCCTCTGCCTCTGCCTCTGCCTCGGCTGCTGCGTTTCCCGTGGCTCTGGTGTTTCTGGTGTTTGATTTCTACAACTATTGTCATATCCCCTTGCAGAACGAAGCTGTGGAACGGTTTCTCTCACCTCCCTTATTCGGTTGGAAATTTCTGCCAACCTGGCTCATGGAACTCTTCTATAGAGGCTTGCTTATCTCGATTGATAGTCAACCCTACCCAGTGGAACAAGGCTTCTTCTTCTTGTTGCCCCCGTGGGGAGGGATGGGAGGGTGGTCTACAAATAATGGAGTCTCACGATGAGACAGGATGCCAGGCACCAGATCGCACCATTCTCTGTATTAACAATTGTGGCTTCTTTGGCAGAGCTGCTACCATGAATATGTGCTCAAAATGTTATAAGGACATGCTGTTGAAGCAGGATCAGGCCAAACTTGCGGCATCATCGGTCGAAAACATTGTGAATGGCAGCTCTAGCAGCAGCAGCGGGAAAGAGGCTACAACTGTGTGTTCTACTGATGTACAAATTCGAACTGTGGAGATCAAGACAATACATGCAGAGATTTGTCAGGATTCATCTTCTAATGAGAGTTTAGAGATGAAAGTCAAGACTGGTCCCAGTAGATGCACGACTTGCCAGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTGCAACACATCGTTATTCTGACAAACACAATTGCACTTTTGATTATCGGACAGTTGGGCAGGATGCTATAGCTAAAGCCAACCCTGTAGTTAAGGCAGAAAAGCTTGACAAAATCTAG 900 0.4644 MGCRQIPTISRIRVDSKQGVPTPIRFSTFIALRPLPLPLPRLLRFPWLWCFWCLISTTIVISPCRTKLWNGFSHLPYSVGNFCQPGSWNSSIEACLSRLIVNPTQWNKASSSCCPRGEGWEGGLQIMESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSSSGKEATTVCSTDVQIRTVEIKTIHAEICQDSSSNESLEMKVKTGPSRCTTCQKRVGLTGFSCKCGNIFCATHRYSDKHNCTFDYRTVGQDAIAKANPVVKAEKLDKI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1113 299 Gene3D - 214 295 IPR035896 -
Acco06g1113 299 FunFam Zinc finger AN1-type containing 6 214 295 - -
Acco06g1113 299 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 143 181 - -
Acco06g1113 299 Gene3D - 127 195 - -
Acco06g1113 299 Pfam A20-like zinc finger 142 165 IPR002653 GO:0003677|GO:0008270
Acco06g1113 299 PANTHER AN1-TYPE ZINC FINGER PROTEIN 142 299 - -
Acco06g1113 299 ProSiteProfiles Zinc finger AN1-type profile. 234 280 IPR000058 GO:0008270
Acco06g1113 299 SMART AN1_Zf_4 240 277 IPR000058 GO:0008270
Acco06g1113 299 Pfam AN1-like Zinc finger 240 276 IPR000058 GO:0008270
Acco06g1113 299 ProSiteProfiles Zinc finger A20-type profile. 138 172 IPR002653 GO:0003677|GO:0008270
Acco06g1113 299 SUPERFAMILY AN1-like Zinc finger 227 294 IPR035896 -
Acco06g1113 299 SMART A20_3 141 165 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1113 Acco-ChrAcco06 7599484 7601461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1113 131 299 C2H2 Transcription Factor Family AT3G52800 42.690 6.71e-38 130