Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1112 ATGGCTACATTCTGTACATACCTGCTCCTTATTCTCTCTGTGACCTTCTCAACATTCAATCTTGGTTCATCTTCTTCTTCGTCAGAGGCGGATATTCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGCTCTGTCTAGCTGGTCCAATACTTCGTCCACTCACTATTGTAACTGGACTGGAATCGCCTGCTCTTCTCACTCTGTCAATTCCATTAATCTTCAGAACTTGAACCTTTCTGGCGAACTCTCACCTTCCATATGTGATCTTCCAAATCTGTCATTCCTCAATCTTGCTGATAATATATTCAACCAGCCCATCCCTCTTCATCTTTCTCAGTGTAGTTCGTTGGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCGATGCAGATTTCTCAGTTTGGTTCTTTAAAGGTGCTTGATTTCAGCAGAAATCACATAGAAGGGGATATCCCAGAGAGCTTGGGCTTCCTCAAGAACCTCCAAGTTCTTAACATGGGAAGTAACCTGCTATCAGGTGATGTACCTGCTATCTTCATGAATTTAACTAAGCTTGCCGTTCTTGACTTGTCTGAAAATCCAAACTTGGATAGTGAGATTCCTGAGAGTATAGGCGAACTTGGAAGTCTCAAGCAACTTCTGTTGCATAGTTCTGGTTTTCACGGTGGAATTCCAGATTCTTTTGCGAACCTGCGTAGTCTGACCAATTTAGACCTCTCTCAGAACAATCTAACAGGTGAGATTTTTCTGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAGGCTTTCGGGGTCATTTCCAAATAGCATTTGTAATGCAAAAGGTCTCATAAATCTCAGCCTCCATACAAATATTTTCAGTGGTTCAATACCCAACACCATTGGTGAATGTAAGAATCTTGAGAGATTTCAGGTTCAGAACAACGAGCTGGCTGGAGACTTCCCTTATTCAATATGGTCATTACCTAAAGTTAAGCTCATTCGAGCTGAAAACAACAGATTCTCAGGACAAATACCTGAATCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGCAAAATCCCTCAGAGTCTTGGGCTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTACGGAGAACTTCCTGTCAACTTTTGTGATTCCCCTGTTATGAGCATTGTGAATCTCTCTCACAATTCCCTTTCCGGTCAAATCCCAGAGCTAAAAAAATGCAGGAAACTGGTTTCATTGTCTTTAGCTGACAATAGTCTCACCGGACAAATCCCTCCTTCCCTTGCTGATTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTGCCCACTTCTTGTTCTGACGATCCTCCAAGACACCATTCCGGGGGTCTCACTGCCCTAGCATGTGCCCTTATCTCTGTAGCTTTCGTTGTAGGAACCGCTGTGTTTGTTGGTGGATTTATTTTGTATAGGAAGTCTAGCAAGAGGAATCAAATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTAATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTTTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACGAGTGGCTGTAAAAAAGCTAGTCAATTTTGGGAACCAGACGTCAAAAAGTTTGAAATCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACCTGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCGTGAGAATTTTGAGCTGCAGTGGGATGCAAGATTGAGGGTTGCCATCAGGGTCGCTCAAGCACTAGCTTATCTTCACAAAGATTATGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAGGAACATTCTGCTGGATGCAAACCTTGAGCCAAAACTCACAGATTTTGCTCTTGACCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCGGCATCTTCCTGCTACAATGCTCCAGAATGTGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTGTATTGCTAGAGCTTGTGACCGGGAAGCAAGCAGAGCAAACAGTATCAACGGAGTCTCTTGACATAGTGAAGTGGGTACGAAGGAGAGTGAACATCACTGATGGGGTGTATCAAGTACTTGATCCCAAAATATCACATTCCAATCAGCAAGAAATGATTGGAGTTCTGGAAATCGCTCTTCATTGTACTTCCGTGGTGCCTGAAAAAAGACCGTCGATGGTAGAAGTTGTACGAACTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTTGAATGAGGAACCCTCGATCCCAATATGA 2649 0.4311 MATFCTYLLLILSVTFSTFNLGSSSSSSEADILLSFKASIEDSRKALSSWSNTSSTHYCNWTGIACSSHSVNSINLQNLNLSGELSPSICDLPNLSFLNLADNIFNQPIPLHLSQCSSLETLNLSNNLIWGTIPMQISQFGSLKVLDFSRNHIEGDIPESLGFLKNLQVLNMGSNLLSGDVPAIFMNLTKLAVLDLSENPNLDSEIPESIGELGSLKQLLLHSSGFHGGIPDSFANLRSLTNLDLSQNNLTGEIFLGLVSSLKNLVSFDVSQNRLSGSFPNSICNAKGLINLSLHTNIFSGSIPNTIGECKNLERFQVQNNELAGDFPYSIWSLPKVKLIRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLADLPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPPRHHSGGLTALACALISVAFVVGTAVFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYVVSLPSGERVAVKKLVNFGNQTSKSLKSEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQEGSLGDLISRENFELQWDARLRVAIRVAQALAYLHKDYVPHLLHRNVKSRNILLDANLEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPECGYSKKATEELDIYSYGVVLLELVTGKQAEQTVSTESLDIVKWVRRRVNITDGVYQVLDPKISHSNQQEMIGVLEIALHCTSVVPEKRPSMVEVVRTLQSLESQTIAANSQDLNEEPSIPI 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1112 882 PRINTS Leucine-rich repeat signature 453 466 - -
Acco06g1112 882 PRINTS Leucine-rich repeat signature 240 253 - -
Acco06g1112 882 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Acco06g1112 882 ProSiteProfiles Protein kinase domain profile. 591 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1112 882 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 667 867 - -
Acco06g1112 882 SUPERFAMILY L domain-like 25 295 - -
Acco06g1112 882 Gene3D Ribonuclease Inhibitor 26 181 IPR032675 -
Acco06g1112 882 Gene3D Transferase(Phosphotransferase) domain 1 667 879 - -
Acco06g1112 882 Gene3D Ribonuclease Inhibitor 258 529 IPR032675 -
Acco06g1112 882 SUPERFAMILY L domain-like 220 518 - -
Acco06g1112 882 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Acco06g1112 882 PANTHER LEUCINE RICH REPEAT KINASE 2 45 199 - -
Acco06g1112 882 SUPERFAMILY Protein kinase-like (PK-like) 593 859 IPR011009 -
Acco06g1112 882 FunFam Leucine-rich repeat family protein 28 182 - -
Acco06g1112 882 Pfam Protein tyrosine and serine/threonine kinase 597 859 IPR001245 GO:0004672|GO:0006468
Acco06g1112 882 Gene3D Ribonuclease Inhibitor 182 257 IPR032675 -
Acco06g1112 882 Gene3D Phosphorylase Kinase; domain 1 584 666 - -
Acco06g1112 882 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 261 524 - -
Acco06g1112 882 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 581 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1112 Acco-ChrAcco06 7588523 7591299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1112 33 862 Receptor kinase-like Gene Family AT5G06940 64.200 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g1112 PK_Tyr_Ser-Thr 1.4e-40 CL0016