Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1087 ATGTCTGATTTGGCTGGTCCAAAAATGGTATTCAAAGGGCTTTCTGGGGTTCAGCCACCGAAGTGTCAGGTGAAGGGTTGCAAAGTAGATCTGAGTGATGCTAAGGCTTACTATTCCAGACATAAAATCTGTAGTATGCACTCCAAATCACCCAGGGACGTTGTGGCTGGTCAAGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTTTCACCAGCTTTCTGAATTTGATCTAGTAAAACGAAGTTGCCGCAGGCGGCTTGCTGATAACAGCAATAGCAGAGGTGGTGGATTTCATATGGAATTCACCTCATATCCAAAACTTAGCCTGAGAAATTCAATGCCAACACCAACGTTGTCTGAACAGCTTCCTGGGGATCCAACAGGGGCACTTCCATGGCAGGGTCATTCGGAGTCTCCATCATTGCTTTTCTTGCAGGCAGGTTGTTCTCCAGTTGGTGGGACAAGCTACTCTGGATCCAGAAATTCTTCATCAGGGGAAAGCTTTTCGGGATTGACAGACTCAAGATGTGCTCTCTCTCTTTTGTCAAACCAAGCTTGGGCCCCTCGAAACAGAGCACCAAGTCTTGGTACAAACAATTTGATGAGCTTTGACGAAATGCCCATCACACATCTCCCTGCAACTTCTCATCACGGACACGGGACATCCCTCCACCATCAACTTTCAAATGCCTCGTGGTGTTTCAAGGGCATCGATGTTGGTGCTGCCGATAACTGTTCTCATGACATTGCCCTTGACCTTGGCCTGGGTCACCAAATTTCGCAGCCTATCAGCAACCCTCTTCCTGGGGAGCTTGACTTGTCGCAACAAGGTAGGAGGCATTACATGGATCTAGAGCAGCCCAAGGTCTACGATGATTCTCAGCATCACGTGCACTGGTCTCTCTAG 906 0.4823 MSDLAGPKMVFKGLSGVQPPKCQVKGCKVDLSDAKAYYSRHKICSMHSKSPRDVVAGQEQRFCQQCSRFHQLSEFDLVKRSCRRRLADNSNSRGGGFHMEFTSYPKLSLRNSMPTPTLSEQLPGDPTGALPWQGHSESPSLLFLQAGCSPVGGTSYSGSRNSSSGESFSGLTDSRCALSLLSNQAWAPRNRAPSLGTNNLMSFDEMPITHLPATSHHGHGTSLHHQLSNASWCFKGIDVGAADNCSHDIALDLGLGHQISQPISNPLPGELDLSQQGRRHYMDLEQPKVYDDSQHHVHWSL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1087 301 FunFam Squamosa promoter-binding-like protein 14 14 83 - -
Acco06g1087 301 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 16 261 IPR044817 GO:0003677
Acco06g1087 301 SUPERFAMILY SBT domain 20 93 IPR036893 GO:0003677|GO:0005634
Acco06g1087 301 Gene3D - 13 83 IPR036893 GO:0003677|GO:0005634
Acco06g1087 301 Pfam SBP domain 22 93 IPR004333 GO:0003677
Acco06g1087 301 ProSiteProfiles Zinc finger SBP-type profile. 19 96 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1087 Acco-ChrAcco06 7376498 7381308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1087 21 301 SBP-box Gene Family AT3G57920 39.048 9.84e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco06g1087 SBP 3.2e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1087 06 7376498 7381308 Acco06g1087 06 7376498 7381308 ECH