Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1085 ATGCATCATTATCTGCAGAACGTAGCCACTGAATTAGGGAAATCTAGCACAGGAACTCAAACTGTATTCAACGTGGGACGACCAGGACACCAAAGTCTCGAAACCACCTTCAACAATATTATGTCACCTCTTCAAACCCCACCTGCTTCGTCTGCAACTAGCCGAGCCTGGACGAGCTTTCATCAACCTGACCCTCCTATTGGTTTTTGTTCTGATGAGCTCCTAGATGATTCGCCACTTCCATGCCATAAATCGTCCGGGGATCACTCCACCGTTTCCTCTATACAATATCATTCAGCCTCCCCATTCAGTTTCACTAACTCCTTGCACTCCATCGTTGAATCTTTCTTGTCCAGATGCGAAGAAGAAAGCCTTTCTGATTCTTTGTCCGCTCAATTACAACAAAATGAACTGCCGGCCCCTGAAGATGTTAAGCCCCTCCAAATTTCCTTTCAGCGGAATCCCCAGATCTGTAATAATACATGTACTGTGTGTGATGATTCGCTGGCTGTTGATCAGTCAGATAAGCAGCATTCAAGAGCTTGTAGGAGCTCTCTAACTCGTAATAAAAGAAGAATACGATGGACCAAGGATCTTCATGAGCCTTTTGTCACGATTGTTAATTGTCTCGGTGGTCCTCATAAGGCAAAGCCTAAGTCTATACTACAGATGATGGATTCAGATGTGCTGACCATTTCTCACATCAAAAGTCATTTGCAGAAATATCGATCTACAACATGCGACCGGAAAGACTTGCAGGAAAGATCTGGAGAAGGAAACCAACCAGAAGGAGTCTCGGAGCTTCAACTTAAAATCCATAAGCAAATTGAGGAATCACTACAACTTCAACGTGAGGTCCAAAGGAGTCTTAACGAGCAACTAGAGATACAACGAAATTTGCAACAGTTAATAAAACAGCATAAGAAGCAGCTCAAAACAATGTCAGATCCGCAAAATAATAGGTTGGAAGGACTGAGAGTTAAAAAAGCTTTACTTGACGAAAGGTTGTTTTGGCTCTTCTTTGTGCCCGCATTAAATCTCTCAGAAGTGGTGATGATCCACTTGCGAAAGCTTAGATCAAAATCCACTCTCCAATGGCCTCCTTCTGATTTTTTCCTCTGGTCCTCGGTAAACCTAGTTGGGTCTATTGCTCAAAACTCTAGACTATACAGAGCTGAAAGAGCGGTTCCACCTGCCTGTTGTGAAGATCTTGACACGGCTTTGGCTGCTGTTGGTCTCCCCATTAAGCAGGCCCTAAAAGAAGTGAAAGTTGCATTGCTGGAGTATCTGCATTCTACTAGAAGCATTCAGTACTTGGACGCGGATAATATGAGTAGAAACTCGCCTTACTTTCTTGAGGGGCTTTTGAAGAAAGTAGGCATGGCAGGGAACATTCGACGATCAGTTTCCAGGTATTTAAGTTATCATCCCATCAATGAATTTGAGCCCTTCTTCGAAAGCATGGGCTTAAAACCTTGTGAGTATGCATCTCTCTTACCCAAAAATATGATTTATTTGAGTGATGACCAATTGTTGCTGGGGAACTATTACGCTCTTTGTAGCTATGGGATTCCTCGTAATAAGATGGGAAAGATATATATGGAAGCAACTGAAGTGTTTCGATATGATGATGGGGTTTTATCATCAAAGCTTCGAGCTTATGAAAGATTGGGTCTTTGCCAGTCTACTCTGCTAAAAGTTATTGCTTCTAGCCCGTACCTTCTGGTTGGAGATTGTAACCCTGATTTTATCCAGGTTATAGAGAAGTTTAAGCATTATGTTAAGGATATTAATTGGATTGAGGGACAGTTATTGGGTGGGACTTCTTGCAATTGGAGCCAGATGCTTAGGCTCTTGTGCTTTTTTGCCAGGGTTTTGACTGAGCAACAGTTATCTGACATAATCAAGCGGCACCCTAACTTTTTCTTCGAGGGATCGGGAGGTAGTAGTACACTCTCCCTTATAGGCTTCCTGCTAAAATTTGGATTGTCAGTGGATCAAATATCCTTCATATTTGCAAATTTTCCACCGATAAAAGTGAGCAAATTCCTTTCAAATTTGAGGAATTGTTATCTATTCTTTAGTGAAATTGAAATGGAGGCTGCAGAGATTGGGAAGATTTTCAGTTCTCACTCCTTAATGTTGGGTTCTTTCACTTTGAAGAAAACCAACAGTTTACTTTCGAACTTGAATGTTGGGAAGAAACGACTTCGGATGCTCATACAGGATAATCCTCTAGAATTGAAGAATTGGGAATTTGGAAGAAGGGTGAAGCCTTTGCCAGGCACCGACGAAGAGAGAATATCCCGGTTGCGGAAGAGAGAGTTCCTGTTGAGCTTGGGATATCGTGAGGACTCTAAAGAGATGAAAGAAGCATTTAAGGTGTTTAGAGGTAAGGGAGCTGAACTCCAAGAGAGGTTCGACTGTATTGTTCAAGCTGGGTTGGATCCTCAAAACGTGAAGGAAATGGTTAAAGTTTCCCCTCAGATTCTTAACATCAGAACATCTATAATCAAACAGAAAATTGACTATCTTGTAAACGAACTAGGAAATCCCATATCATCTTTAATCAACTTCCCATCTTTTATTAACTACAGAATTGAAAGAGTCCAGCTTAGGTTCTCATTCTATAAGTGGCTTGTGGACCAGGGATGTGCTGATCCCAATCTTTCTTTAAGCACTGTAGTTACATGCATAGAGGACTTCTTTGTACAACAGTATGTAAATCGCCACCCAAATGGCCCCAAGGTCTGGCAGGATTTGAAGAGTAAAATTTTTTGA 2781 0.4171 MHHYLQNVATELGKSSTGTQTVFNVGRPGHQSLETTFNNIMSPLQTPPASSATSRAWTSFHQPDPPIGFCSDELLDDSPLPCHKSSGDHSTVSSIQYHSASPFSFTNSLHSIVESFLSRCEEESLSDSLSAQLQQNELPAPEDVKPLQISFQRNPQICNNTCTVCDDSLAVDQSDKQHSRACRSSLTRNKRRIRWTKDLHEPFVTIVNCLGGPHKAKPKSILQMMDSDVLTISHIKSHLQKYRSTTCDRKDLQERSGEGNQPEGVSELQLKIHKQIEESLQLQREVQRSLNEQLEIQRNLQQLIKQHKKQLKTMSDPQNNRLEGLRVKKALLDERLFWLFFVPALNLSEVVMIHLRKLRSKSTLQWPPSDFFLWSSVNLVGSIAQNSRLYRAERAVPPACCEDLDTALAAVGLPIKQALKEVKVALLEYLHSTRSIQYLDADNMSRNSPYFLEGLLKKVGMAGNIRRSVSRYLSYHPINEFEPFFESMGLKPCEYASLLPKNMIYLSDDQLLLGNYYALCSYGIPRNKMGKIYMEATEVFRYDDGVLSSKLRAYERLGLCQSTLLKVIASSPYLLVGDCNPDFIQVIEKFKHYVKDINWIEGQLLGGTSCNWSQMLRLLCFFARVLTEQQLSDIIKRHPNFFFEGSGGSSTLSLIGFLLKFGLSVDQISFIFANFPPIKVSKFLSNLRNCYLFFSEIEMEAAEIGKIFSSHSLMLGSFTLKKTNSLLSNLNVGKKRLRMLIQDNPLELKNWEFGRRVKPLPGTDEERISRLRKREFLLSLGYREDSKEMKEAFKVFRGKGAELQERFDCIVQAGLDPQNVKEMVKVSPQILNIRTSIIKQKIDYLVNELGNPISSLINFPSFINYRIERVQLRFSFYKWLVDQGCADPNLSLSTVVTCIEDFFVQQYVNRHPNGPKVWQDLKSKIF 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1085 926 SMART mt_12 821 852 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 SMART mt_12 669 700 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 SMART mt_12 632 664 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 SMART mt_12 530 560 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 SMART mt_12 853 884 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 Gene3D Transcription termination factor 3, mitochondrial 649 920 IPR038538 -
Acco06g1085 926 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 177 324 IPR044848 GO:0003700
Acco06g1085 926 Coils Coil 265 310 - -
Acco06g1085 926 NCBIfam myb-like DNA-binding domain, SHAQKYF class 190 244 IPR006447 GO:0003677
Acco06g1085 926 SUPERFAMILY Homeodomain-like 187 244 IPR009057 -
Acco06g1085 926 MobiDBLite consensus disorder prediction 246 265 - -
Acco06g1085 926 Pfam mTERF 627 760 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 Pfam mTERF 774 903 IPR003690 GO:0003690|GO:0006355
Acco06g1085 926 Pfam MYB-CC type transfactor, LHEQLE motif 275 318 IPR025756 -
Acco06g1085 926 Gene3D - 189 246 - -
Acco06g1085 926 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 187 247 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1085 Acco-ChrAcco06 7358922 7366020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1085 190 322 G2-like Transcription Factor Family AT4G28610 48.148 1.33e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco06g1085 mTERF 6.6e-07 No_clan