Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1084 ATGAACGATAACAGAGTCGATTGGCAGGGGCAGATTCAACAGAGGCAAGGACTTAATGGGAATTTCAATTCTGAGTCTGGTCATCGTTCTCGTCAATATTTTGATGTCAAACAGGCTTGGAATATAGGTGGTGGAGCTGAAGAGTCACCACAACACATGGGCTCTGCAAAATCCCCCACCACCATAATGGGTGGTTTTGAATCTCCAACTTCTGCTTTTTATGCAGCAGAACGATACATGGGGTTTCCACAATATCATTCCCAAGTTAACATAAACAATAATAATAATAATCCTTCTTTGTGCTCTCCATTTTCCAAGATTCATGATTTAGAACTCCCTTTGTACCAGCAATCCCCGAGGGAAAACACCTTCTTGGATCATTCGCCTCACCAAGGTAACTTCAGCGTCGAATTATCAAACACCTTGCGAGAATTTCACAACCCAGAAAAACCCAATAAAACACCATGTGGGAATCTGTCAGCCGGTAAGTTTCTTCCAATTGAACAGCACAAATTGTTCATTGACGATGATTCTGCCTCAGTCAGGCGAAACCACACAGTTGGTTGCGGGTCATATAATTTGCCTGCTTCTTCTCATGTAAGCTTCAGTTCACAGCAAGAGAAGATGTGTCCAACAGTTTCAGGAGCGAGTATCACAACAAGTACTGGAAATCCTACTTCTAGTGGTGGCGCAGGAATCTCAAGTAAATCACGTATAAGATGGACTCAGGATCTTCACGACAAGTTTGTTGAATGTGTGAATCGCCTTGGGGGTGCTGAGAAGGCTACACCAAAAGCTATATTAAAGCTGATGGACACAGAGGGGCTGACTATCTTCCATGTAAAGAGTCATTTGCAGGTTTCGCATTTTCTTCAGTTTTCAGATTCTTCATTATCTTGGTTGAAGTACAGAATTGCAAAATACATGCCAGACCCAGCTCAACGGAAGTCCGACAAAAAAGCTCATATAGACGATGTGCATCATATTGATGTCAAAACTGGCTTACAAATCAGGGAGGCGCTTCAGCTACAGCTAGATGTTCAGAGGCATCTCCATGAACAACTAGAGATTCAGAGAAGATTACAGCTTCGTATAGAAGAGCAGGGAAAGCAGCTGAAGATGATGCTTGACCAGCAGCAGAAAACATGTAATGGCTTCTCGGATTTGGGCAGTACAGAAAATAATGATGCATCAGTTAGTCACAAAGAGGCTGGAGGGTCTGGAAATTCCTCTTTCCCTTCCAAGATAAGTTAG 1254 0.4282 MNDNRVDWQGQIQQRQGLNGNFNSESGHRSRQYFDVKQAWNIGGGAEESPQHMGSAKSPTTIMGGFESPTSAFYAAERYMGFPQYHSQVNINNNNNNPSLCSPFSKIHDLELPLYQQSPRENTFLDHSPHQGNFSVELSNTLREFHNPEKPNKTPCGNLSAGKFLPIEQHKLFIDDDSASVRRNHTVGCGSYNLPASSHVSFSSQQEKMCPTVSGASITTSTGNPTSSGGAGISSKSRIRWTQDLHDKFVECVNRLGGAEKATPKAILKLMDTEGLTIFHVKSHLQVSHFLQFSDSSLSWLKYRIAKYMPDPAQRKSDKKAHIDDVHHIDVKTGLQIREALQLQLDVQRHLHEQLEIQRRLQLRIEEQGKQLKMMLDQQQKTCNGFSDLGSTENNDASVSHKEAGGSGNSSFPSKIS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1084 417 Coils Coil 338 358 - -
Acco06g1084 417 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 214 400 IPR044848 GO:0003700
Acco06g1084 417 Pfam MYB-CC type transfactor, LHEQLE motif 335 382 IPR025756 -
Acco06g1084 417 MobiDBLite consensus disorder prediction 1 28 - -
Acco06g1084 417 SUPERFAMILY Homeodomain-like 234 287 IPR009057 -
Acco06g1084 417 NCBIfam myb-like DNA-binding domain, SHAQKYF class 236 287 IPR006447 GO:0003677
Acco06g1084 417 MobiDBLite consensus disorder prediction 383 417 - -
Acco06g1084 417 Gene3D - 235 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1084 Acco-ChrAcco06 7348401 7350835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1084 224 381 G2-like Transcription Factor Family AT3G04450 48.148 1.86e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g1084 Myb_CC_LHEQLE 8e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1084 06 7348401 7350835 Acco06g1084 06 7348401 7350835 ECH