Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1056 ATGAGTTGCTGCGGAGGAGGGGAGGAAGAGATCCCTGGCCTGCCTCCAAACCAATCCGCTGCACCACCTGGAGGGGTTAATGCATATCGTGGCGGAGGAGGAGAGAGAAGAGATCCAAGGGGCAATGCTGCCAAATCAGGCGGTCCACCGAAGGATTTATCAATTGACGCCCCAGCTATTTCACTGGAGGAGCTAAATAGTGTAACTAGAAACTTTCGTTCCGATGCTTTGATTGGAGAAGGTTCCTATGGACGGGTTTTCTACGCAAAGTTGAGAAATGGTCAGGCCGCGGCCATAAAAAAGCTGGATAACGGTTCTTCCCCAGAACCAGACTCTGATTTTACAACACAGTTATCTCTAGTTTCAAGAATAAAGCATGAGCATTTTTTGGAGTTGATGGGATATTGTCTGGAGGGAACCAACAGAATTTTGGTTTATCAGTATGCAAGCAAGGGCTCACTGCATGATAACTTGGTTGATACAGGAAGGAAAGGTGTACAAGGGGCCGAGCCCGGTCCAACACTAAGGTGGAATGAGAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGCCTTGAGTTTCTTCATGAGAAGTGTCAACCGTCCATAGTTCATCGTGACGTGAGATCAAGCAATGTCTTATTGTTTGATGACTTCGAGACCAAGCTTGCCGATTTCAACTTGACAAACCAGAGTTCTGACACAGCAGCTCGGCTTCATTCAACTAGAGTCTTGGGAACTTTTGGGTATCATGCTCCAGACAATTTCACGTTAGCAAACCTGTTTAGGTATGCCATGACTGGCCAGATTACCCAGAAAAGTGATGTCTACAGTTTTGGAGTGGTGCTCTTAGAACTCCTGACAGGAAGAAAGCCAGTAGACCACACAATGCCCAAGGGACAACAAAGTCTAGTAACGTGGGCAACTCCAAGGCTGAGTGAGGACAAAGTGAAACAGTGTGTGGATCCAAAGCTAAACAATGAATACCCACCCAAGGCCGTTGCTAAGTTGGCAGCAGTCGCAGCACTGTGTGTTCAGTATGAAGCTGACTTCCGGCCAAATATGACGATTGTGGTTAAAGCTCTTCAGCCACTTCTCAATACAAAGCCGGCTGGCCCTGAATCTGGTCCTTGA 1131 0.4713 MSCCGGGEEEIPGLPPNQSAAPPGGVNAYRGGGGERRDPRGNAAKSGGPPKDLSIDAPAISLEELNSVTRNFRSDALIGEGSYGRVFYAKLRNGQAAAIKKLDNGSSPEPDSDFTTQLSLVSRIKHEHFLELMGYCLEGTNRILVYQYASKGSLHDNLVDTGRKGVQGAEPGPTLRWNERVKIAFGAAKGLEFLHEKCQPSIVHRDVRSSNVLLFDDFETKLADFNLTNQSSDTAARLHSTRVLGTFGYHAPDNFTLANLFRYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNTKPAGPESGP 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1056 376 SMART tyrkin_6 72 361 IPR020635 GO:0004713|GO:0006468
Acco06g1056 376 ProSitePatterns Tyrosine protein kinases specific active-site signature. 202 214 IPR008266 GO:0004672|GO:0006468
Acco06g1056 376 FunFam Pti1 kinase-like protein 48 148 - -
Acco06g1056 376 Pfam Protein tyrosine and serine/threonine kinase 76 361 IPR001245 GO:0004672|GO:0006468
Acco06g1056 376 Gene3D Transferase(Phosphotransferase) domain 1 150 371 - -
Acco06g1056 376 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 44 369 - -
Acco06g1056 376 Gene3D Phosphorylase Kinase; domain 1 50 148 - -
Acco06g1056 376 ProSiteProfiles Protein kinase domain profile. 72 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1056 376 FunFam PTI1-like tyrosine-protein kinase 3 150 370 - -
Acco06g1056 376 SUPERFAMILY Protein kinase-like (PK-like) 54 361 IPR011009 -
Acco06g1056 376 PIRSF ILK 49 370 - -
Acco06g1056 376 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Acco06g1056 376 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1056 Acco-ChrAcco06 7145665 7147508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1056 54 376 Glycoside Hydrolase AT3G07070 43.385 2.23e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Acco06g1056 PK_Tyr_Ser-Thr 2.6e-40 CL0016