Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1053 ATGGACAAAGCTTCAGAGACTAGTAGTAGTAGAGAGACACGTGACTTCATGAACGTCGATTCTTTCTCTCAGCTTCCCTTCATCCGCCCTTCCCCTCTTACTAAAGAAAAGCCAATCAAGCTCTTCGGCATTGAGTTCGCTTCCCCCGAAGCCACCGCCACCGTGCCGCCCGCAGACGATTCCGAATCCGCCGAAGACTCAAGCGGCGGGAAGGACAACAACAGCGAGACTAACCGGAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCAACCTCTCAAGCCTTAGGTGGCCACCAAAACGCTCACAAACGAGAGCGCCAACACGCCAAACGAGCCCACCTTCACATGTCTGAAGCTCAAGTCTATGGCCTTGTCAACTACAGGTCTTTCACTTCTCCAACTTCAACGCTAACCACCCCAATGCCTGCTGCTACTTACCCAACTTCTTCTGCTAGGTTTTATGGAAGCCCATATCCTCATCACCACCACAATCCCATCAATGGAAGCCCCTTGGCCTTTTGGCGAATCCCCACCCTCCAAACTAACCCTAATTTGAATAATCGTGACCGTTCGTTGAATCCATTGCCCTCATTTGACAGCGACGATGTCAACAACAACATGAGGGCCTCGTCGCTGCAGCTTGCAGCCGGGTCTGCTTCACCGTTGCAAAACCGGTACGTCATCCATGACTCCAAACCCGGCGTCCACGACCATGTGAGTCTGGATCTTCATCTGTAA 741 0.5182 MDKASETSSSRETRDFMNVDSFSQLPFIRPSPLTKEKPIKLFGIEFASPEATATVPPADDSESAEDSSGGKDNNSETNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLHMSEAQVYGLVNYRSFTSPTSTLTTPMPAATYPTSSARFYGSPYPHHHHNPINGSPLAFWRIPTLQTNPNLNNRDRSLNPLPSFDSDDVNNNMRASSLQLAAGSASPLQNRYVIHDSKPGVHDHVSLDLHL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1053 246 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g1053 246 MobiDBLite consensus disorder prediction 183 205 - -
Acco06g1053 246 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Acco06g1053 246 PANTHER ZINC FINGER PROTEIN GIS 1 246 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Acco06g1053 246 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
Acco06g1053 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Acco06g1053 246 Gene3D Classic Zinc Finger 64 127 - -
Acco06g1053 246 MobiDBLite consensus disorder prediction 50 76 - -
Acco06g1053 246 Pfam C2H2-type zinc finger 80 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1053 Acco-ChrAcco06 7112198 7112938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1053 6 246 C2H2 Transcription Factor Family AT3G58070 38.846 5.25e-39 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1228 02 9106804 9107781 Acco06g1053 06 7112198 7112938 CCT
Acco06g1053 06 7112198 7112938 Acco06g1053 06 7112198 7112938 ECH