Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1036 ATGGCTTCTAGATTCTGGACACAGGGTGCTAGTGACTCTGAGGAGGAGGAGAGTGACTATGATGATGACGTTGGAAATGCAGCGGGTGAACCTACCAATGAAGCTGTTAAAAGCAGATACCTGCAGGTTAATGCCAGTGATAGTGATGATTCTGATGATCAGAAGCGTGTTGTTAGGTCAGCGAAAGACAAGCGTTTCGAAGAGATGTCATCTACAATTGACCAGATGAGGAATGCTATGAAGATTAATGACTGGGTGAGCTTGCAAGAGAGCTTTGATAAGATAAACAAGCAACTCGAGAAAGTCATGCGTATCACTGAATCTGAGAAGGTGCCTACTCTTTACATAAAGGCACTTGTGACATTGGAAGACTTCCTGGCGCAGGCTTTGGCAAATAAGGATGCCAAAAAGAAGATGAGTAGCAGTAATGCTAAAGCATTGAACTCAATGAAGCAGAAATTGAAGAAGAATAATAAGCAATATGAGGATTTGATTACCAAATATAGAGAAAATCCTGAGAGTGAGGAGGACAAAGATGAGGAGGAGACTGAGGATGAGGATGAAAGTGAGGAGGAGGTAATTGAGGAGATTGATAAGATCCAAAAGTCAGATTCTGAAGATGGCGATCAAGATGGTGAGAAGTCAGATGCAATCGATACCCCTTGGGACCAAAAACTCAGCAAGAAAGACAGGCTTATGGATAGGCAATTTATGAAAGACCCTAGTGAGATCTCTTGGGACATGGTTAACAAGAAGTTCAAAGAGGTTGTGTCTGCTAGGGGCAGGAGGGGAACGGGAAGGTTTGAGCAGGTCGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACTCCTGCACAGAAGTTGGAAATTTTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGGTATATGCCTATTAATGTGTGGAAGAAATGTGTGCAGAATATGATGGTCATTCTTGATATTCTTGTGCAGTACCCAAACATAGTTGTTGATGATACGCTGGAGCCTGATGAGAATGAAACTCAAAAGGGTGCTGACCATAGTGGACCAATTCGGGTATGGGGAAACTTAGTTGCATTCCTAGAAAGAATTGATGCTGAGTTTTTCAAGAGCTTGCAATGCATTGATCCTCATACTCGTGAATATGTTGAGAGACTTAGGGATGAGCCCACGTATCTGGCTCTTGCTCAGAATGTCCAGGATTATCTTGAAAGGGTTGGAGATTTTAAAGCTTCGTCGAAGGTAGCCCTTAAATGTGTTGAGCTCATCTATTACAAACCACAGGAGGTTTATGATGCCATGAGGAAATTGGCTGAACTGACTGATGACAATAATGGAGAGGTGGATGATGAGTCTAAAGGGTTTGAGGATATGAGGACTCCTACCGCATTTGTTGTAACTCCTGAGCTTGTTCCTCGAAAACCTACTTTCCCGGAGAATAGTCGGACACTAATGGACTTATTGGTGTCCCTGATATACAAGTATGGGGATGAGCGGACGAAGGCACGTGCTATGCTTTGTGATATATATCACCATGCTCTTCTGGATGAGTTCTCAACTGCCCGTGATCTTTTGCTCATGAGCCATTTGCAGGATAGTGTTCAGCTTATGGACATATCAACGCAGATTCTCTTTAACAGGGCCATGTCACAGCTAGGCCTTTGTGCTTTTCGGGTTGGGCTGATTTCTGAGGCTCATGGCTGTCTCTCTGAATTATATTCTGGTGGAAGGGTGAAGGAGCTGCTTGCCCAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCTGAGCAGGAAAGGTTGGAAAGGAGACGACAGATGCCATATCATATGCACATTAACCTCGAGCTCCTGGAATCAGTGCATCTTATATGTGCCATGCTTTTGGAAGTTCCCAACATTGCAGCTAATGACCATGATGCAAAGCGTAAAGTTATTAGTAAGAATTTCCGTCGCTTGCTTGAGGTCAGTGAGAAACAAACATTTACAGGTCCTCCTGAAAATGTCAGAGATCATGTCATGGCTGCTACAAGGGCTCTTAACAAGGGAGACTTCCACAAGAGTTATGATATTATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAGATCATGACAGGGTTCTGGAAATGCTTAAGGAAAAGATCAAGGAGGAGGCACTAAGGACTTACCTCTTTACCTTCTCTTCATCTTATGACTCTTTGAGCCTGGAACAACTCACAAAAATGTTTGACCTCTCTGTTCCTTGCATCCATAGCATAGTTAGTAGGATGATTTTAAATGAGGAGCTGCATGCAAGCTTGGATGAACCATCTGGCTGCATTATTTTCCAGGATGTAAAGCACTCTAGATTGCATGCTTTGGCATTCCAGTTTACGGAGAAGTTTTCTATCATTGCAGAGAGTAATGAAAGAGCAATGGAGGCAAGGATAGGTGGCGGTGGACTTGATCTTCCCCTAAGGCGGCGAGATAGCCAGGATTATGCTGCTGCTGCTGCAACAACAGTCGGCAGTAGGTGGCAAGACTTGTCAGTTACTCAGACAAGGCAAGGCAGTGGTACCGGACGGGCAGGATATAGTATTGGTGGTGGAAGGCCTTTAACGTTCAGCCAAAATGGCTACACGAGGGACCGGACAGGAAGAGGAGCAGGTGGAGGTTATCAGAGTACACGATATCAAGACTCTGCATATGGTGGTTCGGGGAGGACAACTCAGGGTTCAGCACCAAGGGGAGCCCAGGTGGATGCATCTACTCGTATGGTTAGCCTTAAAGGAGTTCGTGCTTAA 2802 0.4425 MASRFWTQGASDSEEEESDYDDDVGNAAGEPTNEAVKSRYLQVNASDSDDSDDQKRVVRSAKDKRFEEMSSTIDQMRNAMKINDWVSLQESFDKINKQLEKVMRITESEKVPTLYIKALVTLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLITKYRENPESEEDKDEEETEDEDESEEEVIEEIDKIQKSDSEDGDQDGEKSDAIDTPWDQKLSKKDRLMDRQFMKDPSEISWDMVNKKFKEVVSARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGYMPINVWKKCVQNMMVILDILVQYPNIVVDDTLEPDENETQKGADHSGPIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPTYLALAQNVQDYLERVGDFKASSKVALKCVELIYYKPQEVYDAMRKLAELTDDNNGEVDDESKGFEDMRTPTAFVVTPELVPRKPTFPENSRTLMDLLVSLIYKYGDERTKARAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQLMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKRKVISKNFRRLLEVSEKQTFTGPPENVRDHVMAATRALNKGDFHKSYDIIKSLDVWKFVRDHDRVLEMLKEKIKEEALRTYLFTFSSSYDSLSLEQLTKMFDLSVPCIHSIVSRMILNEELHASLDEPSGCIIFQDVKHSRLHALAFQFTEKFSIIAESNERAMEARIGGGGLDLPLRRRDSQDYAAAAATTVGSRWQDLSVTQTRQGSGTGRAGYSIGGGRPLTFSQNGYTRDRTGRGAGGGYQSTRYQDSAYGGSGRTTQGSAPRGAQVDASTRMVSLKGVRA 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1036 933 SUPERFAMILY "Winged helix" DNA-binding domain 711 787 IPR036390 -
Acco06g1036 933 MobiDBLite consensus disorder prediction 46 70 - -
Acco06g1036 933 ProSiteProfiles PCI domain profile. 615 787 IPR000717 -
Acco06g1036 933 Coils Coil 144 171 - -
Acco06g1036 933 MobiDBLite consensus disorder prediction 195 225 - -
Acco06g1036 933 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 863 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Acco06g1036 933 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 46 647 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Acco06g1036 933 Pfam PCI domain 655 783 IPR000717 -
Acco06g1036 933 MobiDBLite consensus disorder prediction 135 153 - -
Acco06g1036 933 MobiDBLite consensus disorder prediction 1 70 - -
Acco06g1036 933 Gene3D - 698 811 - -
Acco06g1036 933 MobiDBLite consensus disorder prediction 175 194 - -
Acco06g1036 933 MobiDBLite consensus disorder prediction 133 153 - -
Acco06g1036 933 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 716 802 IPR000717 -
Acco06g1036 933 MobiDBLite consensus disorder prediction 891 917 - -
Acco06g1036 933 MobiDBLite consensus disorder prediction 853 922 - -
Acco06g1036 933 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 928 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Acco06g1036 933 MobiDBLite consensus disorder prediction 167 225 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1036 1 933 Eukaryotic Initiation Factors Gene Family AT3G56150 66.702 0.0 1191