Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1033 ATGTCTGTTTTGCTGGACACAATCATGGCTGCTGCGGTGGCAATTCCTCCTGAAGTGACCACGAGAACAGACCCGACGCAGATCGAGGTGAAGCTCTTTAACAAGTGGACCTTCGATGACGTTCAGGTCAATGATATCTCTTTGGCTGATTATATTGGAGTGGCCCCATCCAAGCATGCAACATATGTTCCCCACACTGCTGGTAGGTACTCAGTCAAGCGATTCAGGAAGGCGCAGTGTCCAATAATTGAGAGGCTTACTAATTCTCTCATGATGCATGGTAGAAACAATGGGAAGAAAATAATGGCAGTGAGGATTATTAAACATGCCATGGAAATTATCCACCTTCTAACCGATCTGAATCCTATTCAAGTTATTGTTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGATCTGCTGGTGTTGTGAGGAGACAGGCTGTGGATATCTCACCTCTTCGCCGTGTTAATCAGGCTATCTATCTTCTAACTACCGGTGCCCGTGAATCTGCATTCAGAAATATAAAGACCATTGCTGAATGCTTGGCTGATGAACTAATCAATGCAGCAAAGGGGTCATCCAACAGCTATGCAATCAAGAAAAAAGACGAGATTGAAAGAGTTGCCAAGGCAAATCGTTAA 657 0.4444 MSVLLDTIMAAAVAIPPEVTTRTDPTQIEVKLFNKWTFDDVQVNDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIIERLTNSLMMHGRNNGKKIMAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1033 218 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 218 IPR000235 GO:0006412
Acco06g1033 218 Pfam Ribosomal protein S7p/S5e 72 218 IPR023798 -
Acco06g1033 218 PANTHER RIBOSOMAL PROTEIN S7 26 218 IPR000235 GO:0006412
Acco06g1033 218 ProSitePatterns Ribosomal protein S7 signature. 84 110 IPR020606 GO:0003723|GO:0003735|GO:0006412
Acco06g1033 218 NCBIfam 30S ribosomal protein S7 29 218 IPR005716 GO:0003735|GO:0006412|GO:0015935
Acco06g1033 218 SUPERFAMILY Ribosomal protein S7 31 218 IPR036823 -
Acco06g1033 218 CDD uS7_Eukaryote 31 218 IPR005716 GO:0003735|GO:0006412|GO:0015935
Acco06g1033 218 FunFam 40S ribosomal protein S5 12 218 - -
Acco06g1033 218 Gene3D Ribosomal protein S7 domain 12 218 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1033 Acco-ChrAcco06 6963161 6966154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1033 9 218 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 85.238 3.41e-135 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g1033 06 6963161 6966154 Acco06g1033 06 6963161 6966154 ECH