Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1021 ATGGAAACAAAAGTCGGCCGGAGTCAATTTAATTTGCTTAAATATGTCTTGAAAGAGAAATCTGACGCTTGGCTTGTGGATGGATGCGTGCACGCAATAAGCCTTTCTGTCTCGAGGTCTTGTCTTCTGCTTCGGCCTGAAACAGTGAGAGTGGCGGTGATGGAGAAAGCAAATACGTGCGGGCTGGCAAGAACGAAGTCGGATCAGCTGGTGGAGGCTCTGAAGTCGCCGTCGTCGAGTGAATCGATGGGGGTTTTGATGGAGCTGGGTGGAGCAACGCCGTCGAGGAAGTCGAGCAGGCGGATGACGGGGGCATCGCCGGGGAGAAGCGGAGGAGGGAAGAACACGCACATAAGGAAGTCGAGGAGCGCGCAGCTGAAGTTTGAACTGGATGAGGTGAGCAGCGGCGCGGCTCTGAGCCGAGCCTCGAGTGCCAGCTTGGGCCTGTCTTTCTCCTTCACCGGCTTCACTCTTCCTCCCGATGAAATCGCTGACTCCAAGCCTTTCAGCGACGACGATATCCCCGAGGATATTGAAGCTGGAGCTGATAAGCCAAAACTTCAAACAGAACCTACTCTGCCCATTTATCTCAAGTTCAGGGAGGTGAGTTACAAGGTGGTGATCAGAGGCATGACATCAACGGAGGAGAAGGAGATATTGAATGGGATAAGTGGTTGCGTCAATCCAGGAGAAGTTCTGGCTTTGATGGGTCCTTCAGGAAGCGGAAAGACCACACTCCTAAATCTTCTTGGAGGCAGGCTGAGTCAGCCCGCTGTAAGTGGTTCCATCACTTACAATGACCAACCTTATTCCAAGTTCTTGAAGAGCAGGATAGGATTTGTGACTCAAGATGATGTTCTGTTTCCTCACCTCACTGTGAAGGAAACACTGACATACGCAGCGCTCCTGAGACTGCCGAAGACAACTACTAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTCATTCGTGAGCTCGGCTTGGAGAGGTGCCAAGACACGATGATTGGCGGTTCTTTTGTCCGTGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTTTGTTTCTTGACGAACCAACTTCTGGTTTGGATTCTACGACAGCCTCGAGAACTGTTCAGATGCTACAGAACATAGCAGAGGCTGGCAAAACAGTAGTGACAACAATTCACCAACCATCTAGCAGACTCTTCCACAAATTCGATAAGTTAATCCTATTAGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGACGCAATGCTTTACTTCCAATCTATAGGATGCTCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTGGACCTTGCCAATGGAAACATAAATGATGTATCTGTACCATCAGAGTTAGAGGATAAAGTACAAATGGGAAATTCAACAACTGAAACCCGGAATGGGAAACCATCGCCTGCTCTTGTACATGAGTATTTGGTGGAGGCCTATGAGACTCGAGTTGCAGAAATAGAGAAGAAAAAGCTAATGGATCCCATCCCCCTTGATGAAGAAGTGAAGACCCAGGTTTCTTCTCCTAAAAGACAATGGGGTGCGACCTGGCGTGAGCAATATTCCATACTGTTCCGGAGGGGAATCAAAGAGCGAAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTCTGTCCACTGCAATTATCTTAGGATTACTTTGGTGGCAATCAGATGCCACCACACCAAAGGGTCTTCAGGATCAGGCAGGGCTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCAGTGTTCACTGCAATATTTACCTTTCCACAAGAGAGAGCCATGCTAAATAAGGAACGTGCAGCTGATATGTACAGACTAAGTGCATACTTCTTAGCTAGGACTACGAGTGACCTTCCATTGGATTTGGTATTACCAGTACTTTTCCTCCTCGTTGTTTATTTCATGGCTGGTTTGAGAGTGAGCGCAGCTCCATTTTTCCTCAGCATTCTCACTGTTTTCCTGTGCATCGTGGCAGCTCAGGGACTTGGACAAGCCATTGGGGCTACACTAATGGACTTGAAAAGAGCAACAACCTTGGCTTCAGTCACTGTGATGACCTTCATGCTGGCTGGAGGATTCTTTGTGAAGAGAGTCCCTGTATTTATATCTTGGATTCGATACATGTCATTCAACTACCACACATATAAACTTCTATTGAAGGTGCAATATGAGCACATAACACCAAGTGTAAATGGGATGAGAATTGACAGTGGTTGGGCGGAGGTGGCTGCTCTGATAGCCATGGTTTTTGGTTATCGTTTCTTGGCTTACCTTTCTTTGCGACGGATGAAACTTCAGTGA 2373 0.4711 METKVGRSQFNLLKYVLKEKSDAWLVDGCVHAISLSVSRSCLLLRPETVRVAVMEKANTCGLARTKSDQLVEALKSPSSSESMGVLMELGGATPSRKSSRRMTGASPGRSGGGKNTHIRKSRSAQLKFELDEVSSGAALSRASSASLGLSFSFTGFTLPPDEIADSKPFSDDDIPEDIEAGADKPKLQTEPTLPIYLKFREVSYKVVIRGMTSTEEKEILNGISGCVNPGEVLALMGPSGSGKTTLLNLLGGRLSQPAVSGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAALLRLPKTTTKEQKEKRALDVIRELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTASRTVQMLQNIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASDAMLYFQSIGCSPLIAMNPAEFLLDLANGNINDVSVPSELEDKVQMGNSTTETRNGKPSPALVHEYLVEAYETRVAEIEKKKLMDPIPLDEEVKTQVSSPKRQWGATWREQYSILFRRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDATTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLVLPVLFLLVVYFMAGLRVSAAPFFLSILTVFLCIVAAQGLGQAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPVFISWIRYMSFNYHTYKLLLKVQYEHITPSVNGMRIDSGWAEVAALIAMVFGYRFLAYLSLRRMKLQ 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1021 790 SMART AAA_5 229 420 IPR003593 GO:0016887
Acco06g1021 790 Pfam ABC-2 type transporter 538 747 IPR013525 GO:0016020|GO:0140359
Acco06g1021 790 Pfam ABC transporter 220 371 IPR003439 GO:0005524
Acco06g1021 790 FunFam ABC transporter G family member 22 207 437 - -
Acco06g1021 790 Pfam ABC-2 type transporter 400 460 IPR043926 GO:0140359
Acco06g1021 790 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 164 781 - -
Acco06g1021 790 ProSitePatterns ABC transporters family signature. 343 357 IPR017871 GO:0005524|GO:0016887
Acco06g1021 790 MobiDBLite consensus disorder prediction 90 121 - -
Acco06g1021 790 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 197 443 IPR003439 GO:0005524
Acco06g1021 790 CDD ABCG_EPDR 194 425 - -
Acco06g1021 790 Gene3D - 196 436 IPR027417 -
Acco06g1021 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1021 Acco-ChrAcco06 6875713 6884109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1021 213 483 Calmodulin-binding Proteins AT2G36910 28.520 8.98e-15 77.0