Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1015 ATGGGAAACAACAGTGTATGTTTAGGATCGAGAATTTCAAAGAATAGAGAAGTTCCCCAGGTTTCGAATTCAGATGGGTGTTGTACTCGGTTCATAAACCTTATACTTTCCAATAACCACAAAGCGAATGCAAATGCGAATACGAATGGGAATGCAAATGCAACACCGTGCAATAATGAGCAATATTCCATAGACATTGTCGCCGGCAAGCCTCCAGAGGTACCTAAAATTGAAAAGGACGACCCAAAACCGGTACCTGATGAGAGTGCCACCAAAAAAGACCAAGTCCCAGACTCTAAAAAATCCTCACAGCCCATAAGGCGCGTGGAGGAATCTAAGGTCGTCGTAGCAGAAGCATCAACTTCAAGAACAACAAAACAGAAAGCAACATCTGCAGAACCAAAGAAGCCCTACAATGTGAAGAGGCAAGCAGTGGCAGGGCTTAAAGCAGAGTCTGTATTGCAAACAAAAACAGGAAATCTGAAGGAATTCTACACTTTGGGAAGGAAGCTTGGAAATGGACAATTCGGGACAACATTTCTTTGTGTGGAGAAGGACACAGGAAAAGAGTATGCTTGCAAGTCAATAGCCAAGAGGAAACTGAAAAATGAGGAAGAAGTGGAAGATGTGAGGAGGGAGATTCGGATAATGCATCACTTGGCAGGGTGTCCTGATGTGATATCCATAAAAGGGTCTTACGAGGATGCCATGGCTGTTCATGTTGTGATGGAACTATGTTCAGGTGGTGAGTTGTTTGATAGAATTGTGCAGAGGGGGCATTACAGTGAGAGAAAAGCAGCTCAAATAGCAAGGACTATAGTTGGTGTCATTGAAGCTTGTCACTCACTTGGAGTAATGCATCGCGATCTTAAGCCTGAGAATTTTCTCTTCATTAATGAGCGCGAAGATTCTCCCCTTAAGGCCATCGATTTTGGCCTGTCTACTTTCTTCAAACCAGGGGATATATTTAGGGACGTGGTAGGAAGTCCATACTACGTTGCGCCAGAAGTCCTACAGAAGCGTTATGGTCCAGAAGCTGATGTGTGGAGTGCTGGCGTGATCATATACATTCTGTTAAGCGGGGTGCCTCCGTTTTGGGCTGAATCGGAGGCAGGGATATTTAACGAGGTATTGCACAGGGAAATTGATTTCAAGTCAGATCCCTGGCCTAATATTTCTGAAAGTGCAAAAGACTTGGTGAGGAAGATGATCGATAGAGATCCTAGCAAGAGATTGACAGCCCATGAAATCCTTTGCCATCCTTGGATCCGGGTCGATGGATCAGCTCCTGATAAGCCTCTTGACCCTGCAGTTCTAACTCGCCTGAAGCAGTTTTCCGCAATGGACAAGCTCAAAAAAATGGCTCTTAGAGTTATTGCAAAGAACCTGTCGGAAGAAGAAATAGCAGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAATAGTGGTCAAATTAGTTTTAAAGAACTCAAGGCTGGATTGAAAGCCTTTGGGGCTAACATCGATGAATCTGAGATTCACAGTCTAATGCAAGCAGCAGACGTGGACAATAGTGGGACATTAGACTACACTGAATTCATAACAGCAACGTTGAATCTGAACAAAGCCTGGAGAGAAGATAACTTAGTGGCAGCTTTCCATTATTTTGACAAAGATGGAAGTGGCTACATCACTCAGGACGAACTGCAACAAGTTTGTGAAGAATTTGGTCTGAAGAATATTCGCTTGGAGGACATTATCCGTGAGGCTGATCAAAATAATGATGGGCGTATAGACTACAGTGAATTTGTGGCAGTGATGCACGGAAGCAATGCAGATATGGGTAAGAAGGGTGTAAAGGGGAAAAGTAGTAGAGAGAGGCATTATCATTAA 1875 0.4352 MGNNSVCLGSRISKNREVPQVSNSDGCCTRFINLILSNNHKANANANTNGNANATPCNNEQYSIDIVAGKPPEVPKIEKDDPKPVPDESATKKDQVPDSKKSSQPIRRVEESKVVVAEASTSRTTKQKATSAEPKKPYNVKRQAVAGLKAESVLQTKTGNLKEFYTLGRKLGNGQFGTTFLCVEKDTGKEYACKSIAKRKLKNEEEVEDVRREIRIMHHLAGCPDVISIKGSYEDAMAVHVVMELCSGGELFDRIVQRGHYSERKAAQIARTIVGVIEACHSLGVMHRDLKPENFLFINEREDSPLKAIDFGLSTFFKPGDIFRDVVGSPYYVAPEVLQKRYGPEADVWSAGVIIYILLSGVPPFWAESEAGIFNEVLHREIDFKSDPWPNISESAKDLVRKMIDRDPSKRLTAHEILCHPWIRVDGSAPDKPLDPAVLTRLKQFSAMDKLKKMALRVIAKNLSEEEIAGLKEMFKMIDTDNSGQISFKELKAGLKAFGANIDESEIHSLMQAADVDNSGTLDYTEFITATLNLNKAWREDNLVAAFHYFDKDGSGYITQDELQQVCEEFGLKNIRLEDIIREADQNNDGRIDYSEFVAVMHGSNADMGKKGVKGKSSRERHYH 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1015 624 ProSiteProfiles EF-hand calcium-binding domain profile. 538 573 IPR002048 GO:0005509
Acco06g1015 624 MobiDBLite consensus disorder prediction 72 136 - -
Acco06g1015 624 ProSitePatterns EF-hand calcium-binding domain. 551 563 IPR018247 -
Acco06g1015 624 ProSitePatterns EF-hand calcium-binding domain. 585 597 IPR018247 -
Acco06g1015 624 PANTHER SERINE/THREONINE-PROTEIN KINASE 154 597 - -
Acco06g1015 624 CDD STKc_CAMK 164 422 - -
Acco06g1015 624 SUPERFAMILY EF-hand 462 603 IPR011992 -
Acco06g1015 624 ProSiteProfiles Protein kinase domain profile. 165 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1015 624 ProSitePatterns EF-hand calcium-binding domain. 515 527 IPR018247 -
Acco06g1015 624 Pfam EF-hand domain pair 543 601 IPR002048 GO:0005509
Acco06g1015 624 Pfam EF-hand domain pair 471 531 IPR002048 GO:0005509
Acco06g1015 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Acco06g1015 624 MobiDBLite consensus disorder prediction 72 114 - -
Acco06g1015 624 SMART serkin_6 165 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1015 624 Gene3D Transferase(Phosphotransferase) domain 1 251 429 - -
Acco06g1015 624 Pfam Protein kinase domain 165 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g1015 624 FunFam Calcium-dependent protein kinase 1 431 605 - -
Acco06g1015 624 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Acco06g1015 624 FunFam Calcium-dependent protein kinase SK5 251 435 - -
Acco06g1015 624 Gene3D - 430 605 - -
Acco06g1015 624 ProSiteProfiles EF-hand calcium-binding domain profile. 576 607 IPR002048 GO:0005509
Acco06g1015 624 MobiDBLite consensus disorder prediction 117 132 - -
Acco06g1015 624 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Acco06g1015 624 SMART efh_1 506 534 IPR002048 GO:0005509
Acco06g1015 624 SMART efh_1 576 604 IPR002048 GO:0005509
Acco06g1015 624 SMART efh_1 470 498 IPR002048 GO:0005509
Acco06g1015 624 SMART efh_1 542 570 IPR002048 GO:0005509
Acco06g1015 624 Gene3D Phosphorylase Kinase; domain 1 167 250 - -
Acco06g1015 624 ProSiteProfiles EF-hand calcium-binding domain profile. 502 537 IPR002048 GO:0005509
Acco06g1015 624 FunFam Calcium-dependent protein kinase 1 167 250 - -
Acco06g1015 624 SUPERFAMILY Protein kinase-like (PK-like) 164 424 IPR011009 -
Acco06g1015 624 ProSitePatterns Protein kinases ATP-binding region signature. 171 198 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1015 Acco-ChrAcco06 6839061 6841557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1015 1 602 EF-hand Containing Proteins AT3G10660 61.852 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco06g1015 Pkinase 1.7e-73 CL0016