Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1010 ATGAGCAATAACAGCACAGATAGTTCCTCAGGATTCCTAGGATCCAACAACATTAGTGGGTTCGGGTATGCAATAGGAATATCAAGTGGGATTCTGCTGCTCATCACAACCATCACCCTCACCTCCTATTTCTGCACCAGAAAACAGTCGCCGCCATCTTCGCCTTCTGCAGACTCATCGGCTTCTCCAAGAAATCTCCCGACGTTCCTTGAGCCGCATCACACGGTGGTGGTGGATGTGGGGATAGACGAAGCCGCCATTCTGAGCTACCCCAAGCTGCTGTATTCTGAGGCCAAGCTGCAAAAGCCAGATTCTACAGGGACATGCTGCTCCATATGCTTGGGAGAATATAAAACCAGGGATGTGCTTCGGGAGCTACCGGATTGTGGCCATATATTCCACCTCAAGTGCATTGATCCATGGCTCAGACTGCATCCAACGTGTCCTCTCTGCAGAACATCTCCTGTCCCAACACCACTCGCAACGCCTCTGGCCGAGGTCGTTCCATTGACCACCCGACCCTACCTACCATAA 534 0.5169 MSNNSTDSSSGFLGSNNISGFGYAIGISSGILLLITTITLTSYFCTRKQSPPSSPSADSSASPRNLPTFLEPHHTVVVDVGIDEAAILSYPKLLYSEAKLQKPDSTGTCCSICLGEYKTRDVLRELPDCGHIFHLKCIDPWLRLHPTCPLCRTSPVPTPLATPLAEVVPLTTRPYLP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1010 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 157 IPR013083 -
Acco06g1010 177 SMART ring_2 110 151 IPR001841 -
Acco06g1010 177 SUPERFAMILY RING/U-box 97 158 - -
Acco06g1010 177 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 166 IPR045899 -
Acco06g1010 177 CDD RING-H2_EL5-like 109 152 - -
Acco06g1010 177 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Acco06g1010 177 Pfam Ring finger domain 110 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1010 Acco-ChrAcco06 6811403 6811936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1010 8 176 C3H Transcription Factor Family AT5G06490 48.387 3.47e-53 166