Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1009 ATGGCCATGCAAACTGTTTATTTCAAAGAACATGAAGGATTTGCCCACGACACCATTGGGCAATTGTCATCTGTAGCCTCAGCCCCCTGGTGGACTGCCCTTGGATCTCAAACAGTTCGACAGGAATCTTTGGGCCAAATGAAACCCTTTTCACTGGACTTTCCCAACTATGTCGACCATCTCACTGGCCCGAAGCAGCCTGTGGATAAAGGACACACCACACAGTTCACTATCTTCCCAGAAGATTGTGAGATGTCAGATGATACACAAAAGCATCAGGCAGTCATGTCACTTCTTTCATCCTCTCCTAAACCTCGTGGTCATTTTGAGATAAAATTTAATCAGCCTATGATCTGTTCAAAATATCCTTTTATGGATCGATTTTATGGGCTCATCTCAACCTATGGACCTCAGATTCCGGGCCGTTTAATGCTGCCACTCAACCTGACATCCGATGAAGGGCCAATTTATGTAAATGCTAAGCAGTACCATGGGATCATCAGGCGTCGCCAGTCACGTGCAAAGGCTTTACTTGCGAATAAATTTACAAAACGCCGCAGGCCCTATATGCATGAATCACGTCACCTCCATGCAATGAGGCGACCAAGAGGATGTGGTGGTCGCTTCTTGAACACAAGAAATCTGAAGAATGGCAATGGAAATGGAGAAAGCGGAAGCACGGTGATCAAAAATGGGGAGGGCCGATTCCAGTCTAGTGGTTCTCAGAGTTCTGAAGTTCTGCAATCAGAGGGTGGAACTCTCAATTCATCAAAGGAAGCCAATGGCAACAGTTCAAATGTTTCGGGTTTAGAGGTGACAAGCATGTATGCACGTGGCACTTTCGATGGCTTAATTGGTTTCAATCATGTGGGGTCCTCTGTGCATTCCCTTGCAGACATGATAGATAGTGGACGTGGCATTGTTATGCCTGCGAAATGGGTTGCAGCAGCAGGCTATATATCTACCGTCTGGTTTGAAGGCAAATCATCCTTGGCTGACTAG 1002 0.4621 MAMQTVYFKEHEGFAHDTIGQLSSVASAPWWTALGSQTVRQESLGQMKPFSLDFPNYVDHLTGPKQPVDKGHTTQFTIFPEDCEMSDDTQKHQAVMSLLSSSPKPRGHFEIKFNQPMICSKYPFMDRFYGLISTYGPQIPGRLMLPLNLTSDEGPIYVNAKQYHGIIRRRQSRAKALLANKFTKRRRPYMHESRHLHAMRRPRGCGGRFLNTRNLKNGNGNGESGSTVIKNGEGRFQSSGSQSSEVLQSEGGTLNSSKEANGNSSNVSGLEVTSMYARGTFDGLIGFNHVGSSVHSLADMIDSGRGIVMPAKWVAAAGYISTVWFEGKSSLAD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1009 333 ProSiteProfiles NF-YA/HAP2 family profile. 152 212 IPR001289 GO:0003700|GO:0006355
Acco06g1009 333 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 155 209 IPR001289 GO:0003700|GO:0006355
Acco06g1009 333 MobiDBLite consensus disorder prediction 201 267 - -
Acco06g1009 333 PRINTS CCAAT-binding transcription factor subunit B signature 186 209 IPR001289 GO:0003700|GO:0006355
Acco06g1009 333 PRINTS CCAAT-binding transcription factor subunit B signature 155 177 IPR001289 GO:0003700|GO:0006355
Acco06g1009 333 MobiDBLite consensus disorder prediction 212 267 - -
Acco06g1009 333 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 72 273 IPR001289 GO:0003700|GO:0006355
Acco06g1009 333 Gene3D - 153 213 - -
Acco06g1009 333 SMART cbf3 151 212 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1009 Acco-ChrAcco06 6800107 6803570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1009 1 318 CCAAT-HAP2 Transcription Factor Family AT3G05690 42.553 5.07e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Acco06g1009 CBFB_NFYA 3.8e-24 No_clan