Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g1003 ATGGAGAGTAGTGAGTGGAAGCCTAAAGTTGAGATATCACCCAATTGTCCACGGTGTGGGTCTTGTAACACCAAGTTCTGCTACTACAATAACTATAGTTTGACTCAACCTCGCTACTTTTGTAAGGGCTGCAGAAGGTACTGGACCAAAGGAGGATCACTTCGAAATGTCCCCGTGGGAGGCGGCTGCCGGAAGAACAGACGTGGCAGTAAGACTTCCTTCAGACAAGCATCCATGGATGTTCTTCCTCCCAAGATTTCACCTCACGGAGATAATTGTAATAATCCCGCAACAAATCCACCTTCATGTAGCTCATCAGGTGTGTCAGATGCTCCAAATATTGATCTTGCACTTGTTTATGCAAATTTCCTCAATCAAAAGCCAGACCCAAGACCACCAAGCGCAGACGTCATTGTTGGTTTGCCATCAGAAGATCATGATCAAGTTGGTGTGAGTGGGTGTTTGGCAGAATCACAATTGATTGAGAGTGATCAAATGTACCTGTATGGATTCAACTCTATGCCGAAAAATCAGGACGATCATGGGATTGATCAGCGGTGTAGTAGTAGTAGTGGGAGTCATGAAGCTATGAATTTTGAGTTGCCGCCATTGCCAGGTGAAGAGGCGACCTTGCATGATGATATGATGTGGTCCAATAATTCAGGTTTGCACTCCTCGCAGTTCCCTCTTTTTGGTGCTGATGATGCAGACATCTTGTTGGATAATTGGAGCAACTTCCATTTATCCAGGCCTTGA 756 0.4524 MESSEWKPKVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGSKTSFRQASMDVLPPKISPHGDNCNNPATNPPSCSSSGVSDAPNIDLALVYANFLNQKPDPRPPSADVIVGLPSEDHDQVGVSGCLAESQLIESDQMYLYGFNSMPKNQDDHGIDQRCSSSSGSHEAMNFELPPLPGEEATLHDDMMWSNNSGLHSSQFPLFGADDADILLDNWSNFHLSRP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g1003 251 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 6 37 IPR017896 -
Acco06g1003 251 Pfam Dof domain, zinc finger 15 68 IPR003851 GO:0003677|GO:0006355
Acco06g1003 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 187 IPR045174 GO:0003700|GO:0006355
Acco06g1003 251 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Acco06g1003 251 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g1003 Acco-ChrAcco06 6754319 6755074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g1003 6 129 C2C2-Dof Transcription Factor Family AT3G52440 60.156 8.64e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco06g1003 zf-Dof 2.4e-30 No_clan