Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0980 ATGTCTCACCCCAGAAAGAAGCTTCGTTTAAGCTCTGTTTCCGTCAAACTTGACTGCAGCAGCTGCAGGAGACCCAAGCTTTCTCATATATTCCACCCAAAGCCTAAACCCAAGAACCCCTCTTACAATAAACACAAACTTTACAATCTTTCTTCCTCAAGCCAGTACGACTCTGCCACCACCACTACCACCGCTACAACTTTCTCTCCCTACGTCGACTCCTCGCACTTTTCTGACTCTGATAACTTTGGGAATGCGTCGAGGACAGTCGGAGCCTTCGGCAGAGTTGGCGGCGAAGGCGTGGCGGTGGAGAAAGATTCCGACGACCCTTATCTGGATTTTAGGCACTCGATGCTTCAAATGATATTGGAGAATGAGATATACGCCAAGGACGATCTTCGGGAGCTTCTCAATTGTTTTCTTCAGCTCAATTCTCCATACCACCATGGAGCTATAGTCAGAGCTTTCACTGAGATCTGGAATGGCGTCTTCTCTGTGAAGACCAGTTCGCCAAGATTTCACTTCAGTCGCAAGTCACGTGACTTCTGA 549 0.4809 MSHPRKKLRLSSVSVKLDCSSCRRPKLSHIFHPKPKPKNPSYNKHKLYNLSSSSQYDSATTTTTATTFSPYVDSSHFSDSDNFGNASRTVGAFGRVGGEGVAVEKDSDDPYLDFRHSMLQMILENEIYAKDDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGVFSVKTSSPRFHFSRKSRDF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0980 182 ProSiteProfiles OVATE domain profile. 103 162 IPR006458 -
Acco06g0980 182 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 165 IPR038933 GO:0045892
Acco06g0980 182 Pfam Transcriptional repressor, ovate 107 163 IPR006458 -
Acco06g0980 182 NCBIfam uncharacterized plant-specific domain TIGR01568 101 161 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0980 Acco-ChrAcco06 6538435 6538983 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco06g0980 Ovate 1.7e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0980 06 6538435 6538983 Acco06g0980 06 6538435 6538983 ECH