Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0979 ATGAAGCTCCTTCCCTCTCTTCTCAAAACCTTAGAACCCACAAGGTCGTCTTCTTCTTCCTCCTCCTCCTGGTCTTGGCCTTCCTGTCACCATCCTAAAACCCTCTCTTTCCGAGCATCCGACGACGACATCTTCAGAACCATCAACTCTGCTTACCTCGACCTCCCCGACGACGACGCACCCGATCCAATCGAGACCATGATTCGCGGCGGCTTGAGAGCATCGGATCGTCTCTTCTTCGAGCCAGATAAAACCAGCTCCATATTAGAGGCTAAATCAGTGACGACAACCTTGACATTCAAAGACACCCTCGTACTGTCCATGGAATCCCAGGATCCCTTCGTGGATTTTCGCAAATCAATGGAGGAGATGGTGGAAGCTCACGGCGTTAAGGACTGGGACAGTCTTGAAGAGCTCTTGTGTTGGTATCTGAGGGTCAACGCTAAGAGCAATCACGGCTATATTATGGGTGCTTTCGTTGATTTATTGTTTGTTCTTTCTTTGTCTTCTGAATCCTCTTCACTTTCTTCTGCTTCTTCTCCTCTCTCTTTGTATACTTCTTCTCCCTCTTCTTCTTTTACCACTCCTTATACCTCATGTTTGGAAGCAGAGGAAAATGTTCATGTGAAGCAGGAGATTAAACGTGAAGACGAGGAGGCCTCCTCATCGTCTTCAACTGTTTGA 684 0.4751 MKLLPSLLKTLEPTRSSSSSSSSWSWPSCHHPKTLSFRASDDDIFRTINSAYLDLPDDDAPDPIETMIRGGLRASDRLFFEPDKTSSILEAKSVTTTLTFKDTLVLSMESQDPFVDFRKSMEEMVEAHGVKDWDSLEELLCWYLRVNAKSNHGYIMGAFVDLLFVLSLSSESSSLSSASSPLSLYTSSPSSSFTTPYTSCLEAEENVHVKQEIKREDEEASSSSSTV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0979 227 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 30 167 IPR038933 GO:0045892
Acco06g0979 227 Pfam Transcriptional repressor, ovate 110 166 IPR006458 -
Acco06g0979 227 NCBIfam uncharacterized plant-specific domain TIGR01568 106 166 IPR006458 -
Acco06g0979 227 ProSiteProfiles OVATE domain profile. 106 165 IPR006458 -
Acco06g0979 227 MobiDBLite consensus disorder prediction 9 28 - -
Acco06g0979 227 MobiDBLite consensus disorder prediction 208 227 - -
Acco06g0979 227 MobiDBLite consensus disorder prediction 10 28 - -
Acco06g0979 227 MobiDBLite consensus disorder prediction 175 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0979 Acco-ChrAcco06 6529259 6529942 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco06g0979 Ovate 2.2e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1322 02 9876377 9876946 Acco06g0979 06 6529259 6529942 CCT
Acco06g0979 06 6529259 6529942 Acco02g3682 02 51992421 51993107 ECH
Acco06g0979 06 6529259 6529942 Acco06g0979 06 6529259 6529942 ECH